RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 COCHO43405 550 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 OPHN1O60890 802 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 TRIM16O95361 564 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 CST3P01034 146 aaPredicted RBP11.04□□□□□ -0.64
CASC3-210ENST00000584997 SERPINF2P08697 491 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 HOXB2P14652 356 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 CACNA2D1P54289 1103 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 ZNF33AQ06730 810 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 SEMA3BQ13214 749 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 TRPC3Q13507 836 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 SNRNP35Q16560 246 aaKnown RBP11.04□□□□□ -0.64
CASC3-210ENST00000584997 HECTD3Q5T447 861 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 PEAR1Q5VY43 1037 aaPredicted RBP11.04□□□□□ -0.64
CASC3-210ENST00000584997 PIP4P1Q86T03 277 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 PHTF2Q8N3S3 785 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 MINDY1Q8N5J2 469 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 PDILTQ8N807 584 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 TERB1Q8NA31 727 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 GLIS3Q8NEA6 775 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 KCNV2Q8TDN2 545 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 CGRRF1Q99675 332 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 MED10Q9BTT4 135 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 NACA2Q9H009 215 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 SPHK2Q9NRA0 654 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 TMEM30AQ9NV96 361 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 CALCOCO1Q9P1Z2 691 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 NXF1Q9UBU9 619 aaKnown RBP11.04□□□□□ -0.64
CASC3-210ENST00000584997 KLK13Q9UKR3 277 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 NME7Q9Y5B8 376 aa11.04□□□□□ -0.64
CASC3-210ENST00000584997 PCDH15Q96QU1 1955 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 UPK3BL1B0FP48 263 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 UPK3BL2E5RIL1 263 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 EIF3DO15371 548 aaKnown RBP eCLIP11.03□□□□□ -0.64
CASC3-210ENST00000584997 HOXC11O43248 304 aaPredicted RBP11.03□□□□□ -0.64
CASC3-210ENST00000584997 ZNF217O75362 1048 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 TULP3O75386 442 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 FAM163BP0C2L3 166 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 IRF1P10914 325 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 HOXB3P14651 431 aaPredicted RBP11.03□□□□□ -0.64
CASC3-210ENST00000584997 GABRG2P18507 467 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 NTSR1P30989 418 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 WASP42768 502 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 CYP24A1Q07973 514 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 CUL4AQ13619 759 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 SDE2Q6IQ49 451 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 FAM173BQ6P4H8 233 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 FAM35AQ86V20 835 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 BBS7Q8IWZ6 715 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 ETFBKMTQ8IXQ9 262 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 HPS3Q969F9 1004 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 SYAP1Q96A49 352 aaPredicted RBP11.03□□□□□ -0.64
CASC3-210ENST00000584997 CCDC127Q96BQ5 260 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 ZFRQ96KR1 1074 aaKnown RBP11.03□□□□□ -0.64
CASC3-210ENST00000584997 KCNK16Q96T55 309 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 B3GNT5Q9BYG0 378 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 LRRC27Q9C0I9 530 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 CCSER2Q9H7U1 834 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 CHORDC1Q9UHD1 332 aaPredicted RBP11.03□□□□□ -0.64
CASC3-210ENST00000584997 LHX6Q9UPM6 363 aa11.03□□□□□ -0.64
CASC3-210ENST00000584997 WDFY3Q8IZQ1 3526 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 CLIC2O15247 247 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 PHACTR2O75167 634 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 SYPP08247 313 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 ATICP31939 592 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 TUBP50607 506 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 CYP2J2P51589 502 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 SLC5A3P53794 718 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 MYL6P60660 151 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 ASIC1P78348 528 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 RING1Q06587 406 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 HNRNPDQ14103 355 aaKnown RBP11.02□□□□□ -0.65
CASC3-210ENST00000584997 PSMD6Q15008 389 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 ZNF423Q2M1K9 1284 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 GRAMD4Q6IC98 578 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 TMEM25Q86YD3 366 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 CHPFQ8IZ52 775 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 CHCHD4Q8N4Q1 142 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 XXYLT1Q8NBI6 393 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 SCAMP5Q8TAC9 235 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 SCFD1Q8WVM8 642 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 SMARCD1Q96GM5 515 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 TNIP3Q96KP6 325 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 HSPA12BQ96MM6 686 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 XPO6Q96QU8 1125 aaKnown RBP11.02□□□□□ -0.65
CASC3-210ENST00000584997 TNMDQ9H2S6 317 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 CAPN10Q9HC96 672 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 DMAP1Q9NPF5 467 aaPredicted RBP11.02□□□□□ -0.65
CASC3-210ENST00000584997 AGPAT3Q9NRZ7 376 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 DNAJC17Q9NVM6 304 aaKnown RBP11.02□□□□□ -0.65
CASC3-210ENST00000584997 GMIPQ9P107 970 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 CYP8B1Q9UNU6 501 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 NBEAQ8NFP9 2946 aa11.02□□□□□ -0.65
CASC3-210ENST00000584997 ACACAQ13085 2346 aa11.01□□□□□ -0.65
CASC3-210ENST00000584997 IGHV1OR15-9A0A0B4J2B8 117 aa11.01□□□□□ -0.65
CASC3-210ENST00000584997 NEDD8-MDP1E9PL57 170 aa11.01□□□□□ -0.65
CASC3-210ENST00000584997 ARHGAP33O14559 1287 aa11.01□□□□□ -0.65
CASC3-210ENST00000584997 TRIM24O15164 1050 aa11.01□□□□□ -0.65
CASC3-210ENST00000584997 NDUFS2O75306 463 aa11.01□□□□□ -0.65
CASC3-210ENST00000584997 STAU1O95793 577 aaKnown RBP11.01□□□□□ -0.65
CASC3-210ENST00000584997 NDUFV2P19404 249 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms