RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 SNX30Q5VWJ9 437 aa18.87■□□□□ 0.61
ERBB2-221ENST00000584888 WDR5BQ86VZ2 330 aa18.87■□□□□ 0.61
ERBB2-221ENST00000584888 SLC4A11Q8NBS3 891 aa18.87■□□□□ 0.61
ERBB2-221ENST00000584888 OVCA2Q8WZ82 227 aa18.87■□□□□ 0.61
ERBB2-221ENST00000584888 ATP2A3Q93084 1043 aa18.87■□□□□ 0.61
ERBB2-221ENST00000584888 P2RY13Q9BPV8 354 aa18.87■□□□□ 0.61
ERBB2-221ENST00000584888 LINC00597Q9H2U6 94 aa18.87■□□□□ 0.61
ERBB2-221ENST00000584888 RNF40O75150 1001 aa18.86■□□□□ 0.61
ERBB2-221ENST00000584888 OAS1P00973 400 aaKnown RBP18.86■□□□□ 0.61
ERBB2-221ENST00000584888 ZDHHC11BP0C7U3 371 aa18.86■□□□□ 0.61
ERBB2-221ENST00000584888 SDHBP21912 280 aa18.86■□□□□ 0.61
ERBB2-221ENST00000584888 PDE6CP51160 858 aa18.86■□□□□ 0.61
ERBB2-221ENST00000584888 SLC5A3P53794 718 aa18.86■□□□□ 0.61
ERBB2-221ENST00000584888 ZXDBP98169 803 aa18.86■□□□□ 0.61
ERBB2-221ENST00000584888 CUL2Q13617 745 aa18.86■□□□□ 0.61
ERBB2-221ENST00000584888 PPP1R26Q5T8A7 1209 aaPredicted RBP18.86■□□□□ 0.61
ERBB2-221ENST00000584888 CLEC20AQ6ZU45 233 aa18.86■□□□□ 0.61
ERBB2-221ENST00000584888 CEP68Q76N32 757 aa18.86■□□□□ 0.61
ERBB2-221ENST00000584888 IRF2BP1Q8IU81 584 aa18.86■□□□□ 0.61
ERBB2-221ENST00000584888 MLKLQ8NB16 471 aa18.86■□□□□ 0.61
ERBB2-221ENST00000584888 EXOC4Q96A65 974 aa18.86■□□□□ 0.61
ERBB2-221ENST00000584888 IPO9Q96P70 1041 aaKnown RBP18.86■□□□□ 0.61
ERBB2-221ENST00000584888 SLITRK1Q96PX8 696 aa18.86■□□□□ 0.61
ERBB2-221ENST00000584888 RNF38Q9H0F5 515 aa18.86■□□□□ 0.61
ERBB2-221ENST00000584888 SLC8A2Q9UPR5 921 aa18.86■□□□□ 0.61
ERBB2-221ENST00000584888 ATG2BQ96BY7 2078 aa18.86■□□□□ 0.61
ERBB2-221ENST00000584888 LRP3O75074 770 aa18.85■□□□□ 0.61
ERBB2-221ENST00000584888 FAM200BP0CF97 657 aa18.85■□□□□ 0.61
ERBB2-221ENST00000584888 ADORA2BP29275 332 aa18.85■□□□□ 0.61
ERBB2-221ENST00000584888 PXNP49023 591 aaPredicted RBP18.85■□□□□ 0.61
ERBB2-221ENST00000584888 ATXN1P54253 815 aaKnown RBP18.85■□□□□ 0.61
ERBB2-221ENST00000584888 MAP3K7CLP57077 242 aa18.85■□□□□ 0.61
ERBB2-221ENST00000584888 SLC7A9P82251 487 aa18.85■□□□□ 0.61
ERBB2-221ENST00000584888 KCNH2Q12809 1159 aa18.85■□□□□ 0.61
ERBB2-221ENST00000584888 NR1H3Q13133 447 aa18.85■□□□□ 0.61
ERBB2-221ENST00000584888 FBXO43Q4G163 708 aa18.85■□□□□ 0.61
ERBB2-221ENST00000584888 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.85■□□□□ 0.61
ERBB2-221ENST00000584888 FAM160A2Q8N612 972 aaPredicted RBP18.85■□□□□ 0.61
ERBB2-221ENST00000584888 PDZD8Q8NEN9 1154 aa18.85■□□□□ 0.61
ERBB2-221ENST00000584888 CD101Q93033 1021 aa18.85■□□□□ 0.61
ERBB2-221ENST00000584888 TMEM176AQ96HP8 235 aa18.85■□□□□ 0.61
ERBB2-221ENST00000584888 PNPLA8Q9NP80 782 aa18.85■□□□□ 0.61
ERBB2-221ENST00000584888 POLR3BQ9NW08 1133 aaPredicted RBP18.85■□□□□ 0.61
ERBB2-221ENST00000584888 CDV3Q9UKY7 258 aaKnown RBP18.85■□□□□ 0.61
ERBB2-221ENST00000584888 CCDC163A0A0D9SF12 145 aa18.84■□□□□ 0.61
ERBB2-221ENST00000584888 LEFTY2O00292 366 aa18.84■□□□□ 0.61
ERBB2-221ENST00000584888 FGFR1OPO95684 399 aaKnown RBP18.84■□□□□ 0.61
ERBB2-221ENST00000584888 TRIM21P19474 475 aaKnown RBP18.84■□□□□ 0.61
ERBB2-221ENST00000584888 ZNF394Q53GI3 561 aa18.84■□□□□ 0.61
ERBB2-221ENST00000584888 ARHGAP17Q68EM7 881 aa18.84■□□□□ 0.61
ERBB2-221ENST00000584888 KIAA1958Q8N8K9 716 aa18.84■□□□□ 0.61
ERBB2-221ENST00000584888 EZH1Q92800 747 aaPredicted RBP18.84■□□□□ 0.61
ERBB2-221ENST00000584888 FBXO32Q969P5 355 aa18.84■□□□□ 0.61
ERBB2-221ENST00000584888 DUSP16Q9BY84 665 aa18.84■□□□□ 0.61
ERBB2-221ENST00000584888 CHORDC1Q9UHD1 332 aaPredicted RBP18.84■□□□□ 0.61
ERBB2-221ENST00000584888 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.84■□□□□ 0.61
ERBB2-221ENST00000584888 ABL1P00519 1130 aa18.83■□□□□ 0.6
ERBB2-221ENST00000584888 ACO1P21399 889 aaKnown RBP18.83■□□□□ 0.6
ERBB2-221ENST00000584888 TBXAS1P24557 533 aaPredicted RBP18.83■□□□□ 0.6
ERBB2-221ENST00000584888 PGFP49763 221 aa18.83■□□□□ 0.6
ERBB2-221ENST00000584888 GPRIN1Q7Z2K8 1008 aa18.83■□□□□ 0.6
ERBB2-221ENST00000584888 EHBP1Q8NDI1 1231 aa18.83■□□□□ 0.6
ERBB2-221ENST00000584888 GPT2Q8TD30 523 aa18.83■□□□□ 0.6
ERBB2-221ENST00000584888 HEXIM2Q96MH2 286 aaKnown RBP18.83■□□□□ 0.6
ERBB2-221ENST00000584888 UBXN6Q9BZV1 441 aa18.83■□□□□ 0.6
ERBB2-221ENST00000584888 DNAI2Q9GZS0 605 aa18.83■□□□□ 0.6
ERBB2-221ENST00000584888 NUP62CLQ9H1M0 184 aa18.83■□□□□ 0.6
ERBB2-221ENST00000584888 FBXO44Q9H4M3 255 aa18.83■□□□□ 0.6
ERBB2-221ENST00000584888 SEMA4GQ9NTN9 838 aa18.83■□□□□ 0.6
ERBB2-221ENST00000584888 SDK1Q7Z5N4 2213 aa18.82■□□□□ 0.6
ERBB2-221ENST00000584888 MYO16Q9Y6X6 1858 aa18.82■□□□□ 0.6
ERBB2-221ENST00000584888 RPP40O75818 363 aaKnown RBP18.82■□□□□ 0.6
ERBB2-221ENST00000584888 NFATC1O95644 943 aa18.82■□□□□ 0.6
ERBB2-221ENST00000584888 AFPP02771 609 aaKnown RBP18.82■□□□□ 0.6
ERBB2-221ENST00000584888 CCDC192P0DO97 292 aa18.82■□□□□ 0.6
ERBB2-221ENST00000584888 TUBP50607 506 aa18.82■□□□□ 0.6
ERBB2-221ENST00000584888 KIF11P52732 1056 aa18.82■□□□□ 0.6
ERBB2-221ENST00000584888 IFRD2Q12894 506 aaPredicted RBP18.82■□□□□ 0.6
ERBB2-221ENST00000584888 LRMPQ12912 555 aa18.82■□□□□ 0.6
ERBB2-221ENST00000584888 CSRP2Q16527 193 aa18.82■□□□□ 0.6
ERBB2-221ENST00000584888 CAMKK1Q8N5S9 505 aa18.82■□□□□ 0.6
ERBB2-221ENST00000584888 RPLP0P6Q8NHW5 317 aa18.82■□□□□ 0.6
ERBB2-221ENST00000584888 GAB3Q8WWW8 586 aa18.82■□□□□ 0.6
ERBB2-221ENST00000584888 NT5C1BQ96P26 610 aa18.82■□□□□ 0.6
ERBB2-221ENST00000584888 SMPD4Q9NXE4 827 aa18.82■□□□□ 0.6
ERBB2-221ENST00000584888 GMIPQ9P107 970 aa18.82■□□□□ 0.6
ERBB2-221ENST00000584888 SCML2Q9UQR0 700 aa18.82■□□□□ 0.6
ERBB2-221ENST00000584888 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.82■□□□□ 0.6
ERBB2-221ENST00000584888 CPQQ9Y646 472 aa18.82■□□□□ 0.6
ERBB2-221ENST00000584888 USP3Q9Y6I4 520 aa18.82■□□□□ 0.6
ERBB2-221ENST00000584888 YWHAEP62258 255 aaKnown RBP18.81■□□□□ 0.6
ERBB2-221ENST00000584888 DPCR1Q3MIW9 517 aa18.81■□□□□ 0.6
ERBB2-221ENST00000584888 PRR23CQ6ZRP0 262 aa18.81■□□□□ 0.6
ERBB2-221ENST00000584888 RBM43Q6ZSC3 357 aaKnown RBP18.81■□□□□ 0.6
ERBB2-221ENST00000584888 SYT13Q7L8C5 426 aa18.81■□□□□ 0.6
ERBB2-221ENST00000584888 CACNA2D4Q7Z3S7 1137 aa18.81■□□□□ 0.6
ERBB2-221ENST00000584888 ANKRD52Q8NB46 1076 aa18.81■□□□□ 0.6
ERBB2-221ENST00000584888 KAT5Q92993 513 aa18.81■□□□□ 0.6
ERBB2-221ENST00000584888 ZFRQ96KR1 1074 aaKnown RBP18.81■□□□□ 0.6
ERBB2-221ENST00000584888 GBP4Q96PP9 640 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms