RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 OVCA2Q8WZ82 227 aa17.59■□□□□ 0.41
CCDC57-219ENST00000584717 WBP2Q969T9 261 aa17.59■□□□□ 0.41
CCDC57-219ENST00000584717 INTS4Q96HW7 963 aaKnown RBP17.59■□□□□ 0.41
CCDC57-219ENST00000584717 NUSAP1Q9BXS6 441 aaKnown RBP17.59■□□□□ 0.41
CCDC57-219ENST00000584717 SLC39A2Q9NP94 309 aa17.59■□□□□ 0.41
CCDC57-219ENST00000584717 TMEM74BQ9NUR3 256 aa17.59■□□□□ 0.41
CCDC57-219ENST00000584717 GMIPQ9P107 970 aa17.59■□□□□ 0.41
CCDC57-219ENST00000584717 EVLQ9UI08 416 aaPredicted RBP17.59■□□□□ 0.41
CCDC57-219ENST00000584717 MYO18AQ92614 2054 aaKnown RBP17.59■□□□□ 0.41
CCDC57-219ENST00000584717 FAM208BQ5VWN6 2430 aa17.58■□□□□ 0.41
CCDC57-219ENST00000584717 A0A0A0MRY4 1105 aa17.58■□□□□ 0.4
CCDC57-219ENST00000584717 TBC1D3BA6NDS4 549 aa17.58■□□□□ 0.4
CCDC57-219ENST00000584717 TNFRSF10BO14763 440 aa17.58■□□□□ 0.4
CCDC57-219ENST00000584717 EXOC3O60645 756 aa17.58■□□□□ 0.4
CCDC57-219ENST00000584717 TULP3O75386 442 aa17.58■□□□□ 0.4
CCDC57-219ENST00000584717 CEACAM1P13688 526 aa17.58■□□□□ 0.4
CCDC57-219ENST00000584717 CSRP1P21291 193 aaKnown RBP17.58■□□□□ 0.4
CCDC57-219ENST00000584717 SNRPFP62306 86 aaKnown RBP17.58■□□□□ 0.4
CCDC57-219ENST00000584717 EHHADHQ08426 723 aa17.58■□□□□ 0.4
CCDC57-219ENST00000584717 ANO4Q32M45 955 aa17.58■□□□□ 0.4
CCDC57-219ENST00000584717 BTBD8Q5XKL5 378 aa17.58■□□□□ 0.4
CCDC57-219ENST00000584717 PAQR9Q6ZVX9 377 aa17.58■□□□□ 0.4
CCDC57-219ENST00000584717 ETFBKMTQ8IXQ9 262 aa17.58■□□□□ 0.4
CCDC57-219ENST00000584717 ZNF513Q8N8E2 541 aaPredicted RBP17.58■□□□□ 0.4
CCDC57-219ENST00000584717 OTUB2Q96DC9 234 aa17.58■□□□□ 0.4
CCDC57-219ENST00000584717 SDCBP2Q9H190 292 aa17.58■□□□□ 0.4
CCDC57-219ENST00000584717 DMAP1Q9NPF5 467 aaPredicted RBP17.58■□□□□ 0.4
CCDC57-219ENST00000584717 WASF3Q9UPY6 502 aa17.58■□□□□ 0.4
CCDC57-219ENST00000584717 CACNA1GO43497 2377 aa17.58■□□□□ 0.4
CCDC57-219ENST00000584717 TRIM24O15164 1050 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 POLR2DO15514 142 aaKnown RBP17.57■□□□□ 0.4
CCDC57-219ENST00000584717 HOXC11O43248 304 aaPredicted RBP17.57■□□□□ 0.4
CCDC57-219ENST00000584717 CUTAO60888 179 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 AP1G2O75843 785 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 ENGP17813 658 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 ITPKAP23677 461 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 WASP42768 502 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 LMAN2Q12907 356 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 ORC1Q13415 861 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 ZNF667Q5HYK9 610 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 C10orf76Q5T2E6 689 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 FOXD4L5Q5VV16 416 aaPredicted RBP17.57■□□□□ 0.4
CCDC57-219ENST00000584717 LYSMD4Q5XG99 296 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 TMEM25Q86YD3 366 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 SYT12Q8IV01 421 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 DEFB119Q8N690 84 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 FOXD4L4Q8WXT5 416 aaPredicted RBP17.57■□□□□ 0.4
CCDC57-219ENST00000584717 SMARCD1Q96GM5 515 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 ZNF396Q96N95 335 aaPredicted RBP17.57■□□□□ 0.4
CCDC57-219ENST00000584717 ADAM33Q9BZ11 813 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 NACA2Q9H009 215 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 FSCN3Q9NQT6 498 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 SPHK2Q9NRA0 654 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 KRT82Q9NSB4 513 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 DEC1Q9P2X7 70 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 PI4KAP42356 2102 aa17.57■□□□□ 0.4
CCDC57-219ENST00000584717 ZFYVE26Q68DK2 2539 aa17.56■□□□□ 0.4
CCDC57-219ENST00000584717 LRRIQ3A6PVS8 624 aaPredicted RBP17.56■□□□□ 0.4
CCDC57-219ENST00000584717 CFIP05156 583 aa17.56■□□□□ 0.4
CCDC57-219ENST00000584717 CCDC130P13994 396 aa17.56■□□□□ 0.4
CCDC57-219ENST00000584717 PGFP49763 221 aa17.56■□□□□ 0.4
CCDC57-219ENST00000584717 NCOA4Q13772 614 aa17.56■□□□□ 0.4
CCDC57-219ENST00000584717 BYSLQ13895 437 aaKnown RBP17.56■□□□□ 0.4
CCDC57-219ENST00000584717 BMT2Q1RMZ1 405 aa17.56■□□□□ 0.4
CCDC57-219ENST00000584717 FOXD4L6Q3SYB3 417 aaPredicted RBP17.56■□□□□ 0.4
CCDC57-219ENST00000584717 SNX30Q5VWJ9 437 aa17.56■□□□□ 0.4
CCDC57-219ENST00000584717 KIAA1211LQ6NV74 962 aa17.56■□□□□ 0.4
CCDC57-219ENST00000584717 FOXD4L3Q6VB84 417 aaPredicted RBP17.56■□□□□ 0.4
CCDC57-219ENST00000584717 ACOT1Q86TX2 421 aa17.56■□□□□ 0.4
CCDC57-219ENST00000584717 C12orf56Q8IXR9 622 aa17.56■□□□□ 0.4
CCDC57-219ENST00000584717 FUKQ8N0W3 1084 aa17.56■□□□□ 0.4
CCDC57-219ENST00000584717 TERB1Q8NA31 727 aa17.56■□□□□ 0.4
CCDC57-219ENST00000584717 ERLEC1Q96DZ1 483 aa17.56■□□□□ 0.4
CCDC57-219ENST00000584717 TNIP3Q96KP6 325 aa17.56■□□□□ 0.4
CCDC57-219ENST00000584717 VRTNQ9H8Y1 702 aa17.56■□□□□ 0.4
CCDC57-219ENST00000584717 IL37Q9NZH6 218 aa17.56■□□□□ 0.4
CCDC57-219ENST00000584717 CGNQ9P2M7 1197 aaKnown RBP17.56■□□□□ 0.4
CCDC57-219ENST00000584717 ZMIZ1Q9ULJ6 1067 aa17.56■□□□□ 0.4
CCDC57-219ENST00000584717 CACNA1EQ15878 2313 aa17.55■□□□□ 0.4
CCDC57-219ENST00000584717 MYH10P35580 1976 aa17.55■□□□□ 0.4
CCDC57-219ENST00000584717 CEP192Q8TEP8 1941 aa17.55■□□□□ 0.4
CCDC57-219ENST00000584717 ADAMTS9Q9P2N4 1935 aa17.55■□□□□ 0.4
CCDC57-219ENST00000584717 VNN1O95497 513 aa17.55■□□□□ 0.4
CCDC57-219ENST00000584717 YEATS4O95619 227 aa17.55■□□□□ 0.4
CCDC57-219ENST00000584717 ZDHHC11BP0C7U3 371 aa17.55■□□□□ 0.4
CCDC57-219ENST00000584717 HOXB2P14652 356 aa17.55■□□□□ 0.4
CCDC57-219ENST00000584717 GABRG2P18507 467 aa17.55■□□□□ 0.4
CCDC57-219ENST00000584717 AFMP43652 599 aa17.55■□□□□ 0.4
CCDC57-219ENST00000584717 TUBP50607 506 aa17.55■□□□□ 0.4
CCDC57-219ENST00000584717 RPL6Q02878 288 aaKnown RBP17.55■□□□□ 0.4
CCDC57-219ENST00000584717 CUL4BQ13620 913 aa17.55■□□□□ 0.4
CCDC57-219ENST00000584717 KNOP1Q1ED39 458 aaKnown RBP17.55■□□□□ 0.4
CCDC57-219ENST00000584717 TRMT11Q7Z4G4 463 aaKnown RBP17.55■□□□□ 0.4
CCDC57-219ENST00000584717 MIB1Q86YT6 1006 aa17.55■□□□□ 0.4
CCDC57-219ENST00000584717 GRAMD1CQ8IYS0 662 aa17.55■□□□□ 0.4
CCDC57-219ENST00000584717 ZMIZ2Q8NF64 920 aa17.55■□□□□ 0.4
CCDC57-219ENST00000584717 SMOQ99835 787 aa17.55■□□□□ 0.4
CCDC57-219ENST00000584717 SCNM1Q9BWG6 230 aa17.55■□□□□ 0.4
CCDC57-219ENST00000584717 MAGEF1Q9HAY2 307 aa17.55■□□□□ 0.4
CCDC57-219ENST00000584717 CALCOCO1Q9P1Z2 691 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms