RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 SGF29Q96ES7 293 aa10.66□□□□□ -0.7
CDH8-211ENST00000584337 UPF3AQ9H1J1 476 aaKnown RBP10.66□□□□□ -0.7
CDH8-211ENST00000584337 SACM1LQ9NTJ5 587 aa10.66□□□□□ -0.7
CDH8-211ENST00000584337 ITGA11Q9UKX5 1188 aa10.66□□□□□ -0.7
CDH8-211ENST00000584337 IFT52Q9Y366 437 aa10.66□□□□□ -0.7
CDH8-211ENST00000584337 KIDINS220Q9ULH0 1771 aa10.66□□□□□ -0.7
CDH8-211ENST00000584337 TRIM49D1C9J1S8 452 aa10.66□□□□□ -0.7
CDH8-211ENST00000584337 TRIM49P0CI25 452 aa10.66□□□□□ -0.7
CDH8-211ENST00000584337 TRIM49CP0CI26 452 aa10.66□□□□□ -0.7
CDH8-211ENST00000584337 CHRNB1P11230 501 aa10.66□□□□□ -0.7
CDH8-211ENST00000584337 ACAT1P24752 427 aaKnown RBP10.66□□□□□ -0.7
CDH8-211ENST00000584337 HSD17B4P51659 736 aa10.66□□□□□ -0.7
CDH8-211ENST00000584337 CCNIQ14094 377 aa10.66□□□□□ -0.7
CDH8-211ENST00000584337 MAPK11Q15759 364 aa10.66□□□□□ -0.7
CDH8-211ENST00000584337 C15orf59Q2T9L4 293 aaPredicted RBP10.66□□□□□ -0.7
CDH8-211ENST00000584337 PAF1Q8N7H5 531 aa10.66□□□□□ -0.7
CDH8-211ENST00000584337 DAGLBQ8NCG7 672 aa10.66□□□□□ -0.7
CDH8-211ENST00000584337 SLC20A1Q8WUM9 679 aa10.66□□□□□ -0.7
CDH8-211ENST00000584337 DLG3Q92796 817 aa10.66□□□□□ -0.7
CDH8-211ENST00000584337 GTF3C4Q9UKN8 822 aa10.66□□□□□ -0.7
CDH8-211ENST00000584337 DNAJC16Q9Y2G8 782 aa10.66□□□□□ -0.7
CDH8-211ENST00000584337 DLGAP3O95886 979 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 FXR2P51116 673 aaKnown RBP eCLIP10.65□□□□□ -0.7
CDH8-211ENST00000584337 EIF3EP60228 445 aaKnown RBP10.65□□□□□ -0.7
CDH8-211ENST00000584337 PRKD1Q15139 912 aaPredicted RBP10.65□□□□□ -0.7
CDH8-211ENST00000584337 SPOPLQ6IQ16 392 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 TUBA3EQ6PEY2 450 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 TTC23LQ6PF05 361 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 RHOT1Q8IXI2 618 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 SLC43A3Q8NBI5 491 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 HM13Q8TCT9 377 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 SLCO2A1Q92959 643 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 ZFYVE19Q96K21 471 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 GREM2Q9H772 168 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 TBC1D14Q9P2M4 693 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 SNX9Q9Y5X1 595 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 RICTORQ6R327 1708 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 NFAT5O94916 1531 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 TCRBV5S4A2TA0A5A2 114 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 ZSCAN5BA6NJL1 495 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 TTC34A8MYJ7 566 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 SNAP23O00161 211 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 SNRPAP09012 282 aaKnown RBP10.65□□□□□ -0.7
CDH8-211ENST00000584337 TCN1P20061 433 aaPredicted RBP10.65□□□□□ -0.7
CDH8-211ENST00000584337 SERPINB10P48595 397 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 MTM1Q13496 603 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 E2F2Q14209 437 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 PDPK2PQ6A1A2 396 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 ANKS1BQ7Z6G8 1248 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 GABPB2Q8TAK5 448 aaPredicted RBP10.65□□□□□ -0.7
CDH8-211ENST00000584337 SMARCAD1Q9H4L7 1026 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 KANSL3Q9P2N6 904 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 EBF1Q9UH73 591 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 POLIQ9UNA4 740 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 SNX13Q9Y5W8 968 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 EMSYQ7Z589 1322 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 MYO3BQ8WXR4 1341 aa10.65□□□□□ -0.7
CDH8-211ENST00000584337 ILVBLA1L0T0 632 aa10.65□□□□□ -0.71
CDH8-211ENST00000584337 CENPBD1B2RD01 187 aa10.65□□□□□ -0.71
CDH8-211ENST00000584337 TDP2O95551 362 aa10.65□□□□□ -0.71
CDH8-211ENST00000584337 WEE2P0C1S8 567 aa10.65□□□□□ -0.71
CDH8-211ENST00000584337 KCNA4P22459 653 aa10.65□□□□□ -0.71
CDH8-211ENST00000584337 CASP4P49662 377 aa10.65□□□□□ -0.71
CDH8-211ENST00000584337 CDH15P55291 814 aa10.65□□□□□ -0.71
CDH8-211ENST00000584337 ITIH5Q86UX2 942 aa10.65□□□□□ -0.71
CDH8-211ENST00000584337 SPERTQ8NA61 448 aa10.65□□□□□ -0.71
CDH8-211ENST00000584337 FAM47BQ8NA70 645 aa10.65□□□□□ -0.71
CDH8-211ENST00000584337 LILRB4Q8NHJ6 448 aa10.65□□□□□ -0.71
CDH8-211ENST00000584337 FNIP1Q8TF40 1166 aa10.65□□□□□ -0.71
CDH8-211ENST00000584337 TRUB1Q8WWH5 349 aaKnown RBP10.65□□□□□ -0.71
CDH8-211ENST00000584337 SLC35C1Q96A29 364 aa10.65□□□□□ -0.71
CDH8-211ENST00000584337 C17orf80Q9BSJ5 609 aa10.65□□□□□ -0.71
CDH8-211ENST00000584337 RBM38Q9H0Z9 239 aaKnown RBP10.65□□□□□ -0.71
CDH8-211ENST00000584337 MRPL40Q9NQ50 206 aaKnown RBP10.65□□□□□ -0.71
CDH8-211ENST00000584337 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.65□□□□□ -0.71
CDH8-211ENST00000584337 CCRL2O00421 344 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 GAS7O60861 476 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 STAM2O75886 525 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 PIAS1O75925 651 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 KRT1P04264 644 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 PIM1P11309 404 aaPredicted RBP10.64□□□□□ -0.71
CDH8-211ENST00000584337 STMN1P16949 149 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 PRDX6P30041 224 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 RCVRNP35243 200 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 PHC1P78364 1004 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 MINDY2Q8NBR6 621 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 ACTRT2Q8TDY3 377 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 PDCD6IPQ8WUM4 868 aaKnown RBP10.64□□□□□ -0.71
CDH8-211ENST00000584337 CYGBQ8WWM9 190 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 C7orf26Q96N11 449 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 CDRT15Q96T59 188 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 SLC38A7Q9NVC3 462 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 DSEQ9UL01 958 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 EXOC7Q9UPT5 735 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 ERGIC3Q9Y282 383 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 CLDN25C9JDP6 229 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 ALOX15BO15296 676 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 BFSP2Q13515 415 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 PRKG1Q13976 671 aa10.64□□□□□ -0.71
CDH8-211ENST00000584337 PUS10Q3MIT2 529 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms