RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 UBE2Q2Q8WVN8 375 aa17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 OVCA2Q8WZ82 227 aa17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 GOLGA1Q92805 767 aa17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 KHSRPQ92945 711 aaKnown RBP eCLIP17.53■□□□□ 0.47e-7■□□□□ 9.1
CDK5RAP3-230ENST00000584042 PPP2R3CQ969Q6 453 aa17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 FAM149B1Q96BN6 582 aa17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 TRMT2BQ96GJ1 504 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 CDCA3Q99618 268 aaPredicted RBP17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 IRX2Q9BZI1 471 aaPredicted RBP17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 TRIM7Q9C029 511 aa17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 POPDC2Q9HBU9 364 aa17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 DPP7Q9UHL4 492 aa17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 ASB3Q9Y575 518 aa17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 OBSL1O75147 1896 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 YJEFN3A6XGL0 299 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 E7ENQ6 273 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 PALMO75781 387 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 LRG1P02750 347 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 POU2F2P09086 479 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 YWHAQP27348 245 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 HOXA9P31269 272 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 RFC1P35251 1148 aaPredicted RBP17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 PTPN9P43378 593 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 ZNF143P52747 638 aaPredicted RBP17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 EPHB3P54753 998 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 GNG11P61952 73 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 USP46P62068 366 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 YWHAZP63104 245 aaKnown RBP17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 OGDHQ02218 1023 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 IFRD2Q12894 506 aaPredicted RBP17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 PIGHQ14442 188 aaPredicted RBP17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 DUSP6Q16828 381 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 ZNF569Q5MCW4 686 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 PRPF38BQ5VTL8 546 aaKnown RBP17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 TRNP1Q6NT89 227 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 ADGRD2Q7Z7M1 963 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 DAAM2Q86T65 1068 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 ITIH5Q86UX2 942 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 SLC35F6Q8N357 371 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 EMC1Q8N766 993 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 STKLD1Q8NE28 680 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 PDZD8Q8NEN9 1154 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 GIPC2Q8TF65 315 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 FBXO32Q969P5 355 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 PSMG2Q969U7 264 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 MYRFLQ96LU7 910 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 SLITRK1Q96PX8 696 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 ZNF576Q9H609 170 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 MAN1C1Q9NR34 630 aa17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 UXTQ9UBK9 157 aaPredicted RBP17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 COLQQ9Y215 455 aaPredicted RBP17.52■□□□□ 0.4
CDK5RAP3-230ENST00000584042 GRAP2O75791 330 aa17.51■□□□□ 0.39
CDK5RAP3-230ENST00000584042 HMGA1P17096 107 aaKnown RBP17.51■□□□□ 0.39
CDK5RAP3-230ENST00000584042 DESP17661 470 aa17.51■□□□□ 0.39
CDK5RAP3-230ENST00000584042 PSMA2P25787 234 aa17.51■□□□□ 0.39
CDK5RAP3-230ENST00000584042 SDC4P31431 198 aa17.51■□□□□ 0.39
CDK5RAP3-230ENST00000584042 MATKP42679 507 aa17.51■□□□□ 0.39
CDK5RAP3-230ENST00000584042 SLC1A1P43005 524 aa17.51■□□□□ 0.39
CDK5RAP3-230ENST00000584042 PSEN1P49768 467 aa17.51■□□□□ 0.39
CDK5RAP3-230ENST00000584042 YWHAGP61981 247 aaKnown RBP eCLIP17.51■□□□□ 0.39
CDK5RAP3-230ENST00000584042 MESDQ14696 234 aa17.51■□□□□ 0.39
CDK5RAP3-230ENST00000584042 ACAP1Q15027 740 aa17.51■□□□□ 0.39
CDK5RAP3-230ENST00000584042 TAF5Q15542 800 aa17.51■□□□□ 0.39
CDK5RAP3-230ENST00000584042 MON1AQ86VX9 555 aa17.51■□□□□ 0.39
CDK5RAP3-230ENST00000584042 GPR152Q8TDT2 470 aa17.51■□□□□ 0.39
CDK5RAP3-230ENST00000584042 BTBD6Q96KE9 485 aa17.51■□□□□ 0.39
CDK5RAP3-230ENST00000584042 CNPY3Q9BT09 278 aa17.51■□□□□ 0.39
CDK5RAP3-230ENST00000584042 RRN3Q9NYV6 651 aa17.51■□□□□ 0.39
CDK5RAP3-230ENST00000584042 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.51■□□□□ 0.39
CDK5RAP3-230ENST00000584042 STAP1Q9ULZ2 295 aa17.51■□□□□ 0.39
CDK5RAP3-230ENST00000584042 ZMYND10O75800 440 aa17.5■□□□□ 0.39
CDK5RAP3-230ENST00000584042 HNRNPA1P09651 372 aaKnown RBP eCLIP17.5■□□□□ 0.398e-6■□□□□ 10.1
CDK5RAP3-230ENST00000584042 ZDHHC11BP0C7U3 371 aa17.5■□□□□ 0.39
CDK5RAP3-230ENST00000584042 PDGFRAP16234 1089 aa17.5■□□□□ 0.39
CDK5RAP3-230ENST00000584042 NOS2P35228 1153 aa17.5■□□□□ 0.39
CDK5RAP3-230ENST00000584042 MTMR3Q13615 1198 aa17.5■□□□□ 0.39
CDK5RAP3-230ENST00000584042 PPM1LQ5SGD2 360 aa17.5■□□□□ 0.39
CDK5RAP3-230ENST00000584042 HFE2Q6ZVN8 426 aa17.5■□□□□ 0.39
CDK5RAP3-230ENST00000584042 DEFB106AQ8N104 65 aa17.5■□□□□ 0.39
CDK5RAP3-230ENST00000584042 ELMOD1Q8N336 334 aa17.5■□□□□ 0.39
CDK5RAP3-230ENST00000584042 RXFP2Q8WXD0 754 aa17.5■□□□□ 0.39
CDK5RAP3-230ENST00000584042 NDRG1Q92597 394 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-230ENST00000584042 DDX23Q9BUQ8 820 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-230ENST00000584042 NSUN3Q9H649 340 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-230ENST00000584042 TLE6Q9H808 572 aa17.5■□□□□ 0.39
CDK5RAP3-230ENST00000584042 ABCC13Q9NSE7 274 aa17.5■□□□□ 0.39
CDK5RAP3-230ENST00000584042 ZDHHC7Q9NXF8 308 aa17.5■□□□□ 0.39
CDK5RAP3-230ENST00000584042 CLIC5Q9NZA1 410 aa17.5■□□□□ 0.39
CDK5RAP3-230ENST00000584042 LMCD1Q9NZU5 365 aa17.5■□□□□ 0.39
CDK5RAP3-230ENST00000584042 GMIPQ9P107 970 aa17.5■□□□□ 0.39
CDK5RAP3-230ENST00000584042 HCFC2Q9Y5Z7 792 aa17.5■□□□□ 0.39
CDK5RAP3-230ENST00000584042 MYO7AQ13402 2215 aa17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 A0A1W2PQH9 124 aa17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 TMEM110-MUSTN1A8MSY1 372 aa17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 PAPLNO95428 1278 aa17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 FYNP06241 537 aa17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 SPATA31D3P0C874 917 aa17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 TNNT1P13805 278 aa17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 EPCAMP16422 314 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms