RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 K7ENM7 598 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 CETN3O15182 167 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 DNAJC6O75061 913 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 VNN2O95498 520 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 CYP1A1P04798 512 aaPredicted RBP3.23□□□□□ -1.89
CCDC178-213ENST00000583930 GZMAP12544 262 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 ITGA4P13612 1032 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 GLULP15104 373 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 HOXB8P17481 243 aaPredicted RBP3.23□□□□□ -1.89
CCDC178-213ENST00000583930 MARCKSP29966 332 aaPredicted RBP3.23□□□□□ -1.89
CCDC178-213ENST00000583930 FMO5P49326 533 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 SCNN1GP51170 649 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 CLCN3P51790 818 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 EPHB4P54760 987 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 NLRP11P59045 1033 aaKnown RBP3.23□□□□□ -1.89
CCDC178-213ENST00000583930 PPP2R2AP63151 447 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 RBP5P82980 135 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 TAP1Q03518 808 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 ACAP1Q15027 740 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 TAZQ16635 292 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 VWA3BQ502W6 1294 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 KRT39Q6A163 491 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 MCTP1Q6DN14 999 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 VSTM1Q6UX27 236 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 ACAD11Q709F0 780 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 EFCAB13Q8IY85 973 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 RNF149Q8NC42 400 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 LRRN4CLQ8ND94 238 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 FNIP1Q8TF40 1166 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 KBTBD7Q8WVZ9 684 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 LENG1Q96BZ8 264 aaPredicted RBP3.23□□□□□ -1.89
CCDC178-213ENST00000583930 CDK5RAP1Q96SZ6 601 aaKnown RBP3.23□□□□□ -1.89
CCDC178-213ENST00000583930 SMAD5Q99717 465 aaKnown RBP3.23□□□□□ -1.89
CCDC178-213ENST00000583930 HNRNPABQ99729 332 aaKnown RBP3.23□□□□□ -1.89
CCDC178-213ENST00000583930 COLEC11Q9BWP8 271 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 PLEKHA4Q9H4M7 779 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 ARHGEF4Q9NR80 690 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 TBC1D13Q9NVG8 400 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 CAPN11Q9UMQ6 739 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 TRAF6Q9Y4K3 522 aa3.23□□□□□ -1.89
CCDC178-213ENST00000583930 ANHXE9PGG2 379 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 CLDN3O15551 220 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 USO1O60763 962 aaKnown RBP3.22□□□□□ -1.89
CCDC178-213ENST00000583930 AKAP3O75969 853 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 AFPP02771 609 aaKnown RBP3.22□□□□□ -1.89
CCDC178-213ENST00000583930 TUBB4AP04350 444 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 GALTP07902 379 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 EPB41P11171 864 aaKnown RBP3.22□□□□□ -1.89
CCDC178-213ENST00000583930 HOXB4P17483 251 aaPredicted RBP3.22□□□□□ -1.89
CCDC178-213ENST00000583930 HOXC13P31276 330 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 MAGEA9P43362 315 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 NDUFV1P49821 464 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 VAMP7P51809 220 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 ASIC1P78348 528 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 GPR17Q13304 367 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 PNOCQ13519 176 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 PPP2R5DQ14738 602 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 LEXMQ3ZCV2 418 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 PRSS36Q5K4E3 855 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 C1orf228Q6PIY5 440 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 FGD2Q7Z6J4 655 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 PHF13Q86YI8 300 aaPredicted RBP3.22□□□□□ -1.89
CCDC178-213ENST00000583930 VSTM4Q8IW00 320 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 SUGP1Q8IWZ8 645 aaKnown RBP3.22□□□□□ -1.89
CCDC178-213ENST00000583930 MYCT1Q8N699 235 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 PIGOQ8TEQ8 1089 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 NELFBQ8WX92 580 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 CENPIQ92674 756 aaPredicted RBP3.22□□□□□ -1.89
CCDC178-213ENST00000583930 SECISBP2LQ93073 1101 aaKnown RBP3.22□□□□□ -1.89
CCDC178-213ENST00000583930 ISL2Q96A47 359 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 DHX58Q96C10 678 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 BTBD6Q96KE9 485 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 TGS1Q96RS0 853 aaKnown RBP3.22□□□□□ -1.89
CCDC178-213ENST00000583930 STK33Q9BYT3 514 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 S1PR5Q9H228 398 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 MRPL44Q9H9J2 332 aaKnown RBP3.22□□□□□ -1.89
CCDC178-213ENST00000583930 ZFYVE1Q9HBF4 777 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 FRRS1LQ9P0K9 344 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 COG5Q9UP83 839 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 MIA3Q5JRA6 1907 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 A0A1W2PQU0 124 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 TRAPPC3O43617 180 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 TPM3P06753 285 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 ITGAVP06756 1048 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 MYBL1P10243 752 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 PSMA3P25788 255 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 THPOP40225 353 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 PEX3P56589 373 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 BPIFB4P59827 614 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 RING1Q06587 406 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 SCAPQ12770 1279 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 KCNMA1Q12791 1236 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 SMC1AQ14683 1233 aaKnown RBP3.22□□□□□ -1.89
CCDC178-213ENST00000583930 TMEM132DQ14C87 1099 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 NFKBIBQ15653 356 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 PTPN14Q15678 1187 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 PCSK7Q16549 785 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 FAM102BQ5T8I3 360 aa3.22□□□□□ -1.89
CCDC178-213ENST00000583930 UTP14CQ5TAP6 766 aaKnown RBP3.22□□□□□ -1.89
CCDC178-213ENST00000583930 ZBTB37Q5TC79 503 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms