RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 OLFM2O95897 454 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 CHRM1P11229 460 aaPredicted RBP11.85□□□□□ -0.51
CASC3-208ENST00000583649 FDPSP14324 419 aaKnown RBP11.85□□□□□ -0.51
CASC3-208ENST00000583649 FOSBP53539 338 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 TMPRSS3P57727 454 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 NOP14P78316 857 aaKnown RBP11.85□□□□□ -0.51
CASC3-208ENST00000583649 ZXDBP98169 803 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 CYP27A1Q02318 531 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 MYO1EQ12965 1108 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 ORC1Q13415 861 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 POSTNQ15063 836 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 DTHD1Q6ZMT9 781 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 DPH6Q7L8W6 267 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 ADAT2Q7Z6V5 191 aaKnown RBP11.85□□□□□ -0.51
CASC3-208ENST00000583649 MARCH9Q86YJ5 346 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 PHTF2Q8N3S3 785 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 MYCT1Q8N699 235 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 LRRC52Q8N7C0 313 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 SYT2Q8N9I0 419 aaPredicted RBP11.85□□□□□ -0.51
CASC3-208ENST00000583649 UCMAQ8WVF2 138 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 SNX19Q92543 992 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 PRCCQ92733 491 aaPredicted RBP11.85□□□□□ -0.51
CASC3-208ENST00000583649 IGSF8Q969P0 613 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 TMEM176AQ96HP8 235 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 LGMNQ99538 433 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 DUSP9Q99956 384 aaKnown RBP11.85□□□□□ -0.51
CASC3-208ENST00000583649 RNF38Q9H0F5 515 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 ITM2CQ9NQX7 267 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 WSB2Q9NYS7 404 aaPredicted RBP11.85□□□□□ -0.51
CASC3-208ENST00000583649 AGO2Q9UKV8 859 aaKnown RBP11.85□□□□□ -0.51
CASC3-208ENST00000583649 CDH9Q9ULB4 789 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 AGAP1Q9UPQ3 857 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 SNX9Q9Y5X1 595 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 OBSL1O75147 1896 aa11.85□□□□□ -0.51
CASC3-208ENST00000583649 TSC2P49815 1807 aa11.84□□□□□ -0.51
CASC3-208ENST00000583649 RFPL3O75679 317 aa11.84□□□□□ -0.51
CASC3-208ENST00000583649 FAM13AO94988 1023 aa11.84□□□□□ -0.51
CASC3-208ENST00000583649 OAS1P00973 400 aaKnown RBP11.84□□□□□ -0.51
CASC3-208ENST00000583649 KRT19P08727 400 aa11.84□□□□□ -0.51
CASC3-208ENST00000583649 C6P13671 934 aa11.84□□□□□ -0.51
CASC3-208ENST00000583649 POLR2BP30876 1174 aaKnown RBP11.84□□□□□ -0.51
CASC3-208ENST00000583649 TFAMQ00059 246 aaKnown RBP11.84□□□□□ -0.51
CASC3-208ENST00000583649 MESP2Q0VG99 397 aa11.84□□□□□ -0.51
CASC3-208ENST00000583649 RTP5Q14D33 572 aa11.84□□□□□ -0.51
CASC3-208ENST00000583649 EGFLAMQ63HQ2 1017 aa11.84□□□□□ -0.51
CASC3-208ENST00000583649 FAM171BQ6P995 826 aa11.84□□□□□ -0.51
CASC3-208ENST00000583649 CCDC83Q8IWF9 413 aa11.84□□□□□ -0.51
CASC3-208ENST00000583649 OVCA2Q8WZ82 227 aa11.84□□□□□ -0.51
CASC3-208ENST00000583649 SIPA1Q96FS4 1042 aa11.84□□□□□ -0.51
CASC3-208ENST00000583649 TTLL2Q9BWV7 592 aa11.84□□□□□ -0.51
CASC3-208ENST00000583649 PARVGQ9HBI0 331 aa11.84□□□□□ -0.51
CASC3-208ENST00000583649 GDAP2Q9NXN4 497 aa11.84□□□□□ -0.51
CASC3-208ENST00000583649 EIF2B4Q9UI10 523 aaKnown RBP11.84□□□□□ -0.51
CASC3-208ENST00000583649 ITGA11Q9UKX5 1188 aa11.84□□□□□ -0.51
CASC3-208ENST00000583649 L1RE1Q9UN81 338 aa11.84□□□□□ -0.51
CASC3-208ENST00000583649 NAV2Q8IVL1 2488 aa11.84□□□□□ -0.51
CASC3-208ENST00000583649 A0A1B0GVT2 93 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 CYSRT1A8MQ03 144 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 SCAMP3O14828 347 aaKnown RBP11.83□□□□□ -0.52
CASC3-208ENST00000583649 SLC28A2O43868 658 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 TRAK2O60296 914 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 RTN3O95197 1032 aaPredicted RBP11.83□□□□□ -0.52
CASC3-208ENST00000583649 ITGB3P05106 788 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 KRT18P05783 430 aaKnown RBP11.83□□□□□ -0.52
CASC3-208ENST00000583649 BDNFP23560 247 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 GRIA4P48058 902 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 CSRP3P50461 194 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 RBP5P82980 135 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 TAF10Q12962 218 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 HECTD3Q5T447 861 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 CSGALNACT2Q8N6G5 542 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 ZNF248Q8NDW4 579 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 POMGNT1Q8WZA1 660 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 C8orf76Q96K31 380 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 C8orf48Q96LL4 319 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 SYT15Q9BQS2 421 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 BBS2Q9BXC9 721 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 ZHX3Q9H4I2 956 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 OSGEPQ9NPF4 335 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 USP36Q9P275 1121 aaKnown RBP11.83□□□□□ -0.52
CASC3-208ENST00000583649 LSM7Q9UK45 103 aaKnown RBP11.83□□□□□ -0.52
CASC3-208ENST00000583649 ANKRD6Q9Y2G4 727 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 RAD54BQ9Y620 910 aa11.83□□□□□ -0.52
CASC3-208ENST00000583649 NEDD8-MDP1E9PL57 170 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 ENC1O14682 589 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 TLX3O43711 291 aaPredicted RBP11.82□□□□□ -0.52
CASC3-208ENST00000583649 KALRNO60229 2985 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 CACNG3O60359 315 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 TBCAO75347 108 aaKnown RBP11.82□□□□□ -0.52
CASC3-208ENST00000583649 LDOC1O95751 146 aaPredicted RBP11.82□□□□□ -0.52
CASC3-208ENST00000583649 PLA2G4BP0C869 781 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 YWHAQP27348 245 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 PRPHP41219 470 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 DGKGP49619 791 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 CSNK1EP49674 416 aaKnown RBP11.82□□□□□ -0.52
CASC3-208ENST00000583649 TPMTP51580 245 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 C21orf59P57076 290 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 TLE3Q04726 772 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 CCDC173Q0VFZ6 552 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 KCNH2Q12809 1159 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms