RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 FAM92AA1XBS5 289 aa14.29□□□□□ -0.12
CCDC57-218ENST00000583593 SPTLC2O15270 562 aa14.29□□□□□ -0.12
CCDC57-218ENST00000583593 HOXC11O43248 304 aaPredicted RBP14.29□□□□□ -0.12
CCDC57-218ENST00000583593 PPP6R2O75170 966 aa14.29□□□□□ -0.12
CCDC57-218ENST00000583593 RTN3O95197 1032 aaPredicted RBP14.29□□□□□ -0.12
CCDC57-218ENST00000583593 ITPKAP23677 461 aa14.29□□□□□ -0.12
CCDC57-218ENST00000583593 ATICP31939 592 aa14.29□□□□□ -0.12
CCDC57-218ENST00000583593 SLC5A3P53794 718 aa14.29□□□□□ -0.12
CCDC57-218ENST00000583593 SNRPFP62306 86 aaKnown RBP14.29□□□□□ -0.12
CCDC57-218ENST00000583593 LMAN2Q12907 356 aa14.29□□□□□ -0.12
CCDC57-218ENST00000583593 STK38Q15208 465 aa14.29□□□□□ -0.12
CCDC57-218ENST00000583593 HECTD3Q5T447 861 aa14.29□□□□□ -0.12
CCDC57-218ENST00000583593 SLC23A3Q6PIS1 610 aa14.29□□□□□ -0.12
CCDC57-218ENST00000583593 FAM35AQ86V20 835 aa14.29□□□□□ -0.12
CCDC57-218ENST00000583593 C12orf56Q8IXR9 622 aa14.29□□□□□ -0.12
CCDC57-218ENST00000583593 ZMIZ2Q8NF64 920 aa14.29□□□□□ -0.12
CCDC57-218ENST00000583593 OTUB2Q96DC9 234 aa14.29□□□□□ -0.12
CCDC57-218ENST00000583593 INTS4Q96HW7 963 aaKnown RBP14.29□□□□□ -0.12
CCDC57-218ENST00000583593 SPACA7Q96KW9 195 aa14.29□□□□□ -0.12
CCDC57-218ENST00000583593 NUSAP1Q9BXS6 441 aaKnown RBP14.29□□□□□ -0.12
CCDC57-218ENST00000583593 CUEDC2Q9H467 287 aa14.29□□□□□ -0.12
CCDC57-218ENST00000583593 ZSCAN16Q9H4T2 348 aaPredicted RBP14.29□□□□□ -0.12
CCDC57-218ENST00000583593 CD248Q9HCU0 757 aa14.29□□□□□ -0.12
CCDC57-218ENST00000583593 FSCN3Q9NQT6 498 aa14.29□□□□□ -0.12
CCDC57-218ENST00000583593 SPHK2Q9NRA0 654 aa14.29□□□□□ -0.12
CCDC57-218ENST00000583593 BCCIPQ9P287 314 aaKnown RBP eCLIP14.29□□□□□ -0.12
CCDC57-218ENST00000583593 CIZ1Q9ULV3 898 aaPredicted RBP14.29□□□□□ -0.12
CCDC57-218ENST00000583593 PCDH15Q96QU1 1955 aa14.29□□□□□ -0.12
CCDC57-218ENST00000583593 TBC1D3BA6NDS4 549 aa14.28□□□□□ -0.12
CCDC57-218ENST00000583593 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.28□□□□□ -0.12
CCDC57-218ENST00000583593 MAP3K13O43283 966 aa14.28□□□□□ -0.12
CCDC57-218ENST00000583593 STX6O43752 255 aa14.28□□□□□ -0.12
CCDC57-218ENST00000583593 GREM1O60565 184 aa14.28□□□□□ -0.12
CCDC57-218ENST00000583593 BEST1O76090 585 aa14.28□□□□□ -0.12
CCDC57-218ENST00000583593 UBE4BO95155 1302 aa14.28□□□□□ -0.12
CCDC57-218ENST00000583593 GABRG2P18507 467 aa14.28□□□□□ -0.12
CCDC57-218ENST00000583593 MAPK8P45983 427 aa14.28□□□□□ -0.12
CCDC57-218ENST00000583593 TUBP50607 506 aa14.28□□□□□ -0.12
CCDC57-218ENST00000583593 AMPD3Q01432 767 aa14.28□□□□□ -0.12
CCDC57-218ENST00000583593 TRPC3Q13507 836 aa14.28□□□□□ -0.12
CCDC57-218ENST00000583593 BMT2Q1RMZ1 405 aa14.28□□□□□ -0.12
CCDC57-218ENST00000583593 SPDYCQ5MJ68 293 aa14.28□□□□□ -0.12
CCDC57-218ENST00000583593 LYSMD4Q5XG99 296 aa14.28□□□□□ -0.12
CCDC57-218ENST00000583593 UNC13DQ70J99 1090 aa14.28□□□□□ -0.12
CCDC57-218ENST00000583593 FUKQ8N0W3 1084 aa14.28□□□□□ -0.12
CCDC57-218ENST00000583593 TERB1Q8NA31 727 aa14.28□□□□□ -0.12
CCDC57-218ENST00000583593 KCNV2Q8TDN2 545 aa14.28□□□□□ -0.12
CCDC57-218ENST00000583593 SYAP1Q96A49 352 aaPredicted RBP14.28□□□□□ -0.12
CCDC57-218ENST00000583593 FOXD4L1Q9NU39 408 aa14.28□□□□□ -0.12
CCDC57-218ENST00000583593 GMIPQ9P107 970 aa14.28□□□□□ -0.12
CCDC57-218ENST00000583593 TFIP11Q9UBB9 837 aaKnown RBP14.28□□□□□ -0.12
CCDC57-218ENST00000583593 STARD13Q9Y3M8 1113 aa14.28□□□□□ -0.12
CCDC57-218ENST00000583593 FREM2Q5SZK8 3169 aa14.27□□□□□ -0.12
CCDC57-218ENST00000583593 A0A1W2PQF6 199 aa14.27□□□□□ -0.13
CCDC57-218ENST00000583593 VNN1O95497 513 aa14.27□□□□□ -0.13
CCDC57-218ENST00000583593 C4BPAP04003 597 aaKnown RBP14.27□□□□□ -0.13
CCDC57-218ENST00000583593 CLDN10P78369 228 aa14.27□□□□□ -0.13
CCDC57-218ENST00000583593 SEMA3BQ13214 749 aa14.27□□□□□ -0.13
CCDC57-218ENST00000583593 PIP4P1Q86T03 277 aa14.27□□□□□ -0.13
CCDC57-218ENST00000583593 PGBD3Q8N328 593 aa14.27□□□□□ -0.13
CCDC57-218ENST00000583593 DEFB119Q8N690 84 aa14.27□□□□□ -0.13
CCDC57-218ENST00000583593 ZNF513Q8N8E2 541 aaPredicted RBP14.27□□□□□ -0.13
CCDC57-218ENST00000583593 IQUBQ8NA54 791 aa14.27□□□□□ -0.13
CCDC57-218ENST00000583593 PARD3BQ8TEW8 1205 aa14.27□□□□□ -0.13
CCDC57-218ENST00000583593 ACOX2Q99424 681 aa14.27□□□□□ -0.13
CCDC57-218ENST00000583593 SMOQ99835 787 aa14.27□□□□□ -0.13
CCDC57-218ENST00000583593 BLZF1Q9H2G9 400 aa14.27□□□□□ -0.13
CCDC57-218ENST00000583593 SLC39A2Q9NP94 309 aa14.27□□□□□ -0.13
CCDC57-218ENST00000583593 DMAP1Q9NPF5 467 aaPredicted RBP14.27□□□□□ -0.13
CCDC57-218ENST00000583593 COMMD8Q9NX08 183 aa14.27□□□□□ -0.13
CCDC57-218ENST00000583593 CALCOCO1Q9P1Z2 691 aa14.27□□□□□ -0.13
CCDC57-218ENST00000583593 DEC1Q9P2X7 70 aa14.27□□□□□ -0.13
CCDC57-218ENST00000583593 SH3BP1Q9Y3L3 701 aa14.27□□□□□ -0.13
CCDC57-218ENST00000583593 MYH10P35580 1976 aa14.27□□□□□ -0.13
CCDC57-218ENST00000583593 FAM208BQ5VWN6 2430 aa14.26□□□□□ -0.13
CCDC57-218ENST00000583593 LRRIQ3A6PVS8 624 aaPredicted RBP14.26□□□□□ -0.13
CCDC57-218ENST00000583593 TBX18O95935 607 aa14.26□□□□□ -0.13
CCDC57-218ENST00000583593 IRF1P10914 325 aa14.26□□□□□ -0.13
CCDC57-218ENST00000583593 WASP42768 502 aa14.26□□□□□ -0.13
CCDC57-218ENST00000583593 CUL4BQ13620 913 aa14.26□□□□□ -0.13
CCDC57-218ENST00000583593 BYSLQ13895 437 aaKnown RBP14.26□□□□□ -0.13
CCDC57-218ENST00000583593 KNOP1Q1ED39 458 aaKnown RBP14.26□□□□□ -0.13
CCDC57-218ENST00000583593 ANO4Q32M45 955 aa14.26□□□□□ -0.13
CCDC57-218ENST00000583593 C10orf76Q5T2E6 689 aa14.26□□□□□ -0.13
CCDC57-218ENST00000583593 BTBD8Q5XKL5 378 aa14.26□□□□□ -0.13
CCDC57-218ENST00000583593 KIAA1211LQ6NV74 962 aa14.26□□□□□ -0.13
CCDC57-218ENST00000583593 SCARA5Q6ZMJ2 495 aa14.26□□□□□ -0.13
CCDC57-218ENST00000583593 ACOT1Q86TX2 421 aa14.26□□□□□ -0.13
CCDC57-218ENST00000583593 SLC41A1Q8IVJ1 513 aa14.26□□□□□ -0.13
CCDC57-218ENST00000583593 SMARCD1Q96GM5 515 aa14.26□□□□□ -0.13
CCDC57-218ENST00000583593 MED10Q9BTT4 135 aa14.26□□□□□ -0.13
CCDC57-218ENST00000583593 KLF16Q9BXK1 252 aaPredicted RBP14.26□□□□□ -0.13
CCDC57-218ENST00000583593 CAPN10Q9HC96 672 aa14.26□□□□□ -0.13
CCDC57-218ENST00000583593 CSNK1G1Q9HCP0 422 aa14.26□□□□□ -0.13
CCDC57-218ENST00000583593 HMGXB4Q9UGU5 601 aa14.26□□□□□ -0.13
CCDC57-218ENST00000583593 SLC6A14Q9UN76 642 aa14.26□□□□□ -0.13
CCDC57-218ENST00000583593 CACNA1EQ15878 2313 aa14.26□□□□□ -0.13
CCDC57-218ENST00000583593 IGHV1OR15-9A0A0B4J2B8 117 aa14.25□□□□□ -0.13
CCDC57-218ENST00000583593 SPAARA0A1B0GVQ0 90 aa14.25□□□□□ -0.13
CCDC57-218ENST00000583593 UPK3BL1B0FP48 263 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms