RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 RAB27BO00194 218 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 PODXLO00592 558 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 DCLK1O15075 740 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 KCNQ3O43525 872 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 TRIAP1O43715 76 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 SUN1O94901 812 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 TPH1P17752 444 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 BTF3P20290 206 aaKnown RBP4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 NDUFV1P49821 464 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 TOB1P50616 345 aaPredicted RBP4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 CXADRP78310 365 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 DYRK1AQ13627 763 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 TRIM14Q14142 442 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 CCDC38Q502W7 563 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 TLDC1Q6P9B6 456 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 TMPRSS9Q7Z410 1059 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 SKAP1Q86WV1 359 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 TMEM132CQ8N3T6 1108 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 NKAPQ8N5F7 415 aaKnown RBP4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 CCT6BQ92526 530 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 SNX19Q92543 992 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 TRIM63Q969Q1 353 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 MUL1Q969V5 352 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 LRRC46Q96FV0 321 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 OSBPL9Q96SU4 736 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 ZSWIM1Q9BR11 485 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 PTDSS2Q9BVG9 487 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 TMEM8AQ9HCN3 771 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 GALNT9Q9HCQ5 603 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 TMEM74BQ9NUR3 256 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 TBC1D23Q9NUY8 699 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 CDY1Q9Y6F8 540 aa4.41□□□□□ -1.7
SMCHD1-209ENST00000583441 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.7
SMCHD1-209ENST00000583441 NBNO60934 754 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 CSTBP04080 98 aaKnown RBP4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 CHRM3P20309 590 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 CD6P30203 668 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 HALP42357 657 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 NPTX2P47972 431 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 CCT5P48643 541 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 PTDSS1P48651 473 aaKnown RBP4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 LILRA4P59901 499 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 TMEM95Q3KNT9 176 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 ZACNQ401N2 412 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 CACHD1Q5VU97 1274 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 PLAG1Q6DJT9 500 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 MRNIPQ6NTE8 343 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 SLC30A10Q6XR72 485 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 SPARTQ8N0X7 666 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 SEMA6DQ8NFY4 1073 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 RNF31Q96EP0 1072 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 SCLT1Q96NL6 688 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 RMDN3Q96TC7 470 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 GDF15Q99988 308 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 ISCA1Q9BUE6 129 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 EBF3Q9H4W6 596 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 ZBTB26Q9HCK0 441 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 MRPS18AQ9NVS2 196 aaKnown RBP4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 CA14Q9ULX7 337 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 MORC2Q9Y6X9 1032 aaPredicted RBP4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 AATKQ6ZMQ8 1374 aa4.4□□□□□ -1.71
SMCHD1-209ENST00000583441 A0A0B4J269 797 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 FAM234BA2RU67 622 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 H7C4K7 107 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 SYT5O00445 386 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 RRP9O43818 475 aaKnown RBP4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 ORC4O43929 436 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 PIAS2O75928 621 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 GLP2RO95838 553 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 EGR1P18146 543 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 WT1P19544 449 aaPredicted RBP4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 GABRB3P28472 473 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 SLC5A2P31639 672 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 CHKAP35790 457 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 DGKEP52429 567 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 ZNF134P52741 427 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 PRKAG1P54619 331 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 FPGSQ05932 587 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 FOXO1Q12778 655 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 SLC10A2Q12908 348 aaPredicted RBP4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 TUBB3Q13509 450 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 BOP1Q14137 746 aaKnown RBP4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 E2F2Q14209 437 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 ELF2Q15723 593 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 NPY5RQ15761 445 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 SLC5A9Q2M3M2 681 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 CERCAMQ5T4B2 595 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 MORN5Q5VZ52 161 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 ICE2Q659A1 982 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 B3GNTL1Q67FW5 361 aaPredicted RBP4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 FCRLBQ6BAA4 426 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 FCRL6Q6DN72 434 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 ZDHHC24Q6UX98 284 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 TMEM108Q6UXF1 575 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 SLC15A3Q8IY34 581 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 SMAP1Q8IYB5 467 aaPredicted RBP4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 ADGRG5Q8IZF4 528 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 Q8NA96 180 aa4.39□□□□□ -1.71
SMCHD1-209ENST00000583441 NSUN7Q8NE18 718 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms