RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 DGKKQ5KSL6 1271 aa18.95■□□□□ 0.62
SNX11-212ENST00000583320 HGSNATQ68CP4 663 aa18.95■□□□□ 0.62
SNX11-212ENST00000583320 RAD9BQ6WBX8 426 aa18.95■□□□□ 0.62
SNX11-212ENST00000583320 IRF2BP2Q7Z5L9 587 aa18.95■□□□□ 0.62
SNX11-212ENST00000583320 C1orf127Q8N9H9 656 aa18.95■□□□□ 0.62
SNX11-212ENST00000583320 BEST2Q8NFU1 509 aa18.95■□□□□ 0.62
SNX11-212ENST00000583320 CXorf38Q8TB03 319 aa18.95■□□□□ 0.62
SNX11-212ENST00000583320 GAB3Q8WWW8 586 aa18.95■□□□□ 0.62
SNX11-212ENST00000583320 TATDN2Q93075 761 aa18.95■□□□□ 0.62
SNX11-212ENST00000583320 MSANTD3Q96H12 275 aa18.95■□□□□ 0.62
SNX11-212ENST00000583320 ZNF512Q96ME7 567 aaPredicted RBP18.95■□□□□ 0.62
SNX11-212ENST00000583320 KREMEN1Q96MU8 473 aa18.95■□□□□ 0.62
SNX11-212ENST00000583320 SLITRK6Q9H5Y7 841 aa18.95■□□□□ 0.62
SNX11-212ENST00000583320 FAM124BQ9H5Z6 455 aaPredicted RBP18.95■□□□□ 0.62
SNX11-212ENST00000583320 C8orf33Q9H7E9 229 aaPredicted RBP18.95■□□□□ 0.62
SNX11-212ENST00000583320 DPP3Q9NY33 737 aa18.95■□□□□ 0.62
SNX11-212ENST00000583320 ARHGAP20Q9P2F6 1191 aa18.95■□□□□ 0.62
SNX11-212ENST00000583320 WASF3Q9UPY6 502 aa18.95■□□□□ 0.62
SNX11-212ENST00000583320 EPN1Q9Y6I3 576 aaPredicted RBP18.95■□□□□ 0.62
SNX11-212ENST00000583320 A0A1W2PRU2 124 aa18.94■□□□□ 0.62
SNX11-212ENST00000583320 SOWAHDA6NJG2 315 aa18.94■□□□□ 0.62
SNX11-212ENST00000583320 ZNF500O60304 480 aaPredicted RBP18.94■□□□□ 0.62
SNX11-212ENST00000583320 RPP40O75818 363 aaKnown RBP18.94■□□□□ 0.62
SNX11-212ENST00000583320 GFPT2O94808 682 aa18.94■□□□□ 0.62
SNX11-212ENST00000583320 TOP3BO95985 862 aaKnown RBP18.94■□□□□ 0.62
SNX11-212ENST00000583320 MYL6P60660 151 aa18.94■□□□□ 0.62
SNX11-212ENST00000583320 ACAP1Q15027 740 aa18.94■□□□□ 0.62
SNX11-212ENST00000583320 ARHGAP44Q17R89 818 aa18.94■□□□□ 0.62
SNX11-212ENST00000583320 CTXN3Q4LDR2 81 aa18.94■□□□□ 0.62
SNX11-212ENST00000583320 TPGS2Q68CL5 300 aa18.94■□□□□ 0.62
SNX11-212ENST00000583320 RNF19BQ6ZMZ0 732 aa18.94■□□□□ 0.62
SNX11-212ENST00000583320 TMC8Q8IU68 726 aa18.94■□□□□ 0.62
SNX11-212ENST00000583320 FAM71AQ8IYT1 594 aa18.94■□□□□ 0.62
SNX11-212ENST00000583320 ELMOD1Q8N336 334 aa18.94■□□□□ 0.62
SNX11-212ENST00000583320 TMEM130Q8N3G9 435 aa18.94■□□□□ 0.62
SNX11-212ENST00000583320 LOXL4Q96JB6 756 aa18.94■□□□□ 0.62
SNX11-212ENST00000583320 FAM84AQ96KN4 292 aa18.94■□□□□ 0.62
SNX11-212ENST00000583320 CCDC42Q96M95 316 aa18.94■□□□□ 0.62
SNX11-212ENST00000583320 PI4K2AQ9BTU6 479 aa18.94■□□□□ 0.62
SNX11-212ENST00000583320 XYLT2Q9H1B5 865 aa18.94■□□□□ 0.62
SNX11-212ENST00000583320 NHEJ1Q9H9Q4 299 aaPredicted RBP18.94■□□□□ 0.62
SNX11-212ENST00000583320 POLR3BQ9NW08 1133 aaPredicted RBP18.94■□□□□ 0.62
SNX11-212ENST00000583320 SIX4Q9UIU6 781 aa18.94■□□□□ 0.62
SNX11-212ENST00000583320 R3HCC1Q9Y3T6 440 aaKnown RBP18.94■□□□□ 0.62
SNX11-212ENST00000583320 YIPF1Q9Y548 306 aa18.94■□□□□ 0.62
SNX11-212ENST00000583320 NUP210Q8TEM1 1887 aaPredicted RBP18.93■□□□□ 0.62
SNX11-212ENST00000583320 EIF3CLB5ME19 914 aaKnown RBP18.93■□□□□ 0.62
SNX11-212ENST00000583320 FOXN3O00409 490 aaPredicted RBP18.93■□□□□ 0.62
SNX11-212ENST00000583320 SYN3O14994 580 aa18.93■□□□□ 0.62
SNX11-212ENST00000583320 NDUFA10O95299 355 aa18.93■□□□□ 0.62
SNX11-212ENST00000583320 MPLP40238 635 aa18.93■□□□□ 0.62
SNX11-212ENST00000583320 TNK2Q07912 1038 aa18.93■□□□□ 0.62
SNX11-212ENST00000583320 KLHL30Q0D2K2 578 aa18.93■□□□□ 0.62
SNX11-212ENST00000583320 CUL2Q13617 745 aa18.93■□□□□ 0.62
SNX11-212ENST00000583320 ZNF699Q32M78 642 aa18.93■□□□□ 0.62
SNX11-212ENST00000583320 RALGPS2Q86X27 583 aaPredicted RBP18.93■□□□□ 0.62
SNX11-212ENST00000583320 YAF2Q8IY57 180 aa18.93■□□□□ 0.62
SNX11-212ENST00000583320 KDF1Q8NAX2 398 aaPredicted RBP18.93■□□□□ 0.62
SNX11-212ENST00000583320 C18orf25Q96B23 403 aaPredicted RBP18.93■□□□□ 0.62
SNX11-212ENST00000583320 EIF3CQ99613 913 aaKnown RBP18.93■□□□□ 0.62
SNX11-212ENST00000583320 NIF3L1Q9GZT8 377 aa18.93■□□□□ 0.62
SNX11-212ENST00000583320 CRISPLD1Q9H336 500 aa18.93■□□□□ 0.62
SNX11-212ENST00000583320 APOBEC3GQ9HC16 384 aaKnown RBP18.93■□□□□ 0.62
SNX11-212ENST00000583320 SLC38A7Q9NVC3 462 aa18.93■□□□□ 0.62
SNX11-212ENST00000583320 AFF4Q9UHB7 1163 aaKnown RBP18.93■□□□□ 0.62
SNX11-212ENST00000583320 NUB1Q9Y5A7 615 aa18.93■□□□□ 0.62
SNX11-212ENST00000583320 H7C4K7 107 aa18.92■□□□□ 0.62
SNX11-212ENST00000583320 ZSCAN12O43309 604 aa18.92■□□□□ 0.62
SNX11-212ENST00000583320 LCA5LO95447 670 aa18.92■□□□□ 0.62
SNX11-212ENST00000583320 ITGB3P05106 788 aa18.92■□□□□ 0.62
SNX11-212ENST00000583320 EIF4A3P38919 411 aaKnown RBP18.92■□□□□ 0.62
SNX11-212ENST00000583320 NOVA1P51513 510 aaKnown RBP18.92■□□□□ 0.62
SNX11-212ENST00000583320 YWHAEP62258 255 aaKnown RBP18.92■□□□□ 0.62
SNX11-212ENST00000583320 ASTE1Q2TB18 679 aaPredicted RBP18.92■□□□□ 0.62
SNX11-212ENST00000583320 C1orf228Q6PIY5 440 aa18.92■□□□□ 0.62
SNX11-212ENST00000583320 ARID3BQ8IVW6 561 aaPredicted RBP18.92■□□□□ 0.62
SNX11-212ENST00000583320 CCAR2Q8N163 923 aaKnown RBP18.92■□□□□ 0.62
SNX11-212ENST00000583320 LRRC52Q8N7C0 313 aa18.92■□□□□ 0.62
SNX11-212ENST00000583320 LEMD2Q8NC56 503 aa18.92■□□□□ 0.62
SNX11-212ENST00000583320 KAT5Q92993 513 aa18.92■□□□□ 0.62
SNX11-212ENST00000583320 CNTN6Q9UQ52 1028 aa18.92■□□□□ 0.62
SNX11-212ENST00000583320 ADGRG1Q9Y653 693 aa18.92■□□□□ 0.62
SNX11-212ENST00000583320 ATG2BQ96BY7 2078 aa18.91■□□□□ 0.62
SNX11-212ENST00000583320 GOLGA6L9A6NEM1 432 aa18.91■□□□□ 0.62
SNX11-212ENST00000583320 IPO7O95373 1038 aaKnown RBP18.91■□□□□ 0.62
SNX11-212ENST00000583320 CCDC175P0C221 793 aa18.91■□□□□ 0.62
SNX11-212ENST00000583320 P4HA1P13674 534 aa18.91■□□□□ 0.62
SNX11-212ENST00000583320 LRPAP1P30533 357 aa18.91■□□□□ 0.62
SNX11-212ENST00000583320 KRT83P78385 493 aa18.91■□□□□ 0.62
SNX11-212ENST00000583320 FOXC1Q12948 553 aa18.91■□□□□ 0.62
SNX11-212ENST00000583320 MTF1Q14872 753 aa18.91■□□□□ 0.62
SNX11-212ENST00000583320 TDRD12Q587J7 1177 aaKnown RBP18.91■□□□□ 0.62
SNX11-212ENST00000583320 ZNF667Q5HYK9 610 aa18.91■□□□□ 0.62
SNX11-212ENST00000583320 RNF43Q68DV7 783 aa18.91■□□□□ 0.62
SNX11-212ENST00000583320 ZNF280DQ6N043 979 aa18.91■□□□□ 0.62
SNX11-212ENST00000583320 VPS36Q86VN1 386 aa18.91■□□□□ 0.62
SNX11-212ENST00000583320 E2F7Q96AV8 911 aa18.91■□□□□ 0.62
SNX11-212ENST00000583320 SUSD3Q96L08 255 aa18.91■□□□□ 0.62
SNX11-212ENST00000583320 DEF6Q9H4E7 631 aa18.91■□□□□ 0.62
SNX11-212ENST00000583320 SPTLC3Q9NUV7 552 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms