RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 SREBF2Q12772 1141 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 NFE2Q16621 373 aaPredicted RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 PPP1R15BQ5SWA1 713 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 CDCA2Q69YH5 1023 aaPredicted RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 PPTC7Q8NI37 304 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 ZFYVE28Q9HCC9 887 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 EIF2B3Q9NR50 452 aaKnown RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 CNTN6Q9UQ52 1028 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 YDJCA8MPS7 323 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 H3BRB1 525 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 AGPSO00116 658 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 ALDH1A1P00352 501 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 MYL3P08590 195 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 MYBL2P10244 700 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 RPL9P32969 192 aaKnown RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 KCNA1Q09470 495 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 CRYMQ14894 314 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 LMBRD2Q68DH5 695 aaPredicted RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 FAM47EQ6ZV65 393 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 PID1Q7Z2X4 250 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 SIAH1Q8IUQ4 282 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 EPS8L3Q8TE67 593 aaKnown RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 ALG3Q92685 438 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 PI4K2AQ9BTU6 479 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 TUT1Q9H6E5 874 aaKnown RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 OLA1Q9NTK5 396 aaKnown RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 PDP2Q9P2J9 529 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 KANSL3Q9P2N6 904 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 MORF4L1Q9UBU8 362 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 FGF10O15520 208 aaPredicted RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 DDX5P17844 614 aaKnown RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 CLDN10P78369 228 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 XIAPP98170 497 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 TMEM132BQ14DG7 1078 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 GEN1Q17RS7 908 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 SPOPLQ6IQ16 392 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 MFSD7Q6UXD7 560 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 RGS9BPQ6ZS82 235 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 MAML1Q92585 1016 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 TMEM237Q96Q45 408 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 CPNE1Q99829 537 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 FAM49AQ9H0Q0 323 aaPredicted RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 ASCC2Q9H1I8 757 aaPredicted RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 FZD8Q9H461 694 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 POLD4Q9HCU8 107 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 PIN4Q9Y237 131 aaKnown RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 NRAPQ86VF7 1730 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 LAMB1P07942 1786 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 SMIM35A0A1B0GVV1 85 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 BCLAF3A2AJT9 711 aaKnown RBP6.06□□□□□ -1.44
RTTN-209ENST00000583043 MANSC4A6NHS7 340 aaPredicted RBP6.06□□□□□ -1.44
RTTN-209ENST00000583043 PI4K2BG5E9Z4 385 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 ATMINO43313 823 aaPredicted RBP6.06□□□□□ -1.44
RTTN-209ENST00000583043 PECAM1P16284 738 aaPredicted RBP6.06□□□□□ -1.44
RTTN-209ENST00000583043 TKTP29401 623 aaKnown RBP6.06□□□□□ -1.44
RTTN-209ENST00000583043 GP5P40197 560 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 ART3Q13508 389 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 KPNB1Q14974 876 aaKnown RBP6.06□□□□□ -1.44
RTTN-209ENST00000583043 CDO1Q16878 200 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 CAPN12Q6ZSI9 719 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 DAW1Q8N136 415 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 MICAL1Q8TDZ2 1067 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 RXFP2Q8WXD0 754 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 IRGQQ8WZA9 623 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 ERP27Q96DN0 273 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 DTNBP1Q96EV8 351 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 THOC1Q96FV9 657 aaKnown RBP6.06□□□□□ -1.44
RTTN-209ENST00000583043 FSD1LQ9BXM9 530 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 NOD2Q9HC29 1040 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 TBC1D13Q9NVG8 400 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 AP4E1Q9UPM8 1137 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 AFG3L2Q9Y4W6 797 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 KANSL1LA0AUZ9 987 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 LIN7AO14910 233 aaPredicted RBP6.06□□□□□ -1.44
RTTN-209ENST00000583043 ADSLP30566 484 aaPredicted RBP6.06□□□□□ -1.44
RTTN-209ENST00000583043 VHLP40337 213 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 SMARCB1Q12824 385 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 DPYSL3Q14195 570 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 STXBP5Q5T5C0 1151 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 BSPRYQ5W0U4 402 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 ARHGAP17Q68EM7 881 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 CHSY1Q86X52 802 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 TMPRSS6Q8IU80 811 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 ANKRD52Q8NB46 1076 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 PTCD2Q8WV60 388 aaKnown RBP6.06□□□□□ -1.44
RTTN-209ENST00000583043 ZKSCAN4Q969J2 545 aaPredicted RBP6.06□□□□□ -1.44
RTTN-209ENST00000583043 CAMKK2Q96RR4 588 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 KIFC3Q9BVG8 833 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 ZDHHC18Q9NUE0 388 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 THAP1Q9NVV9 213 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 NENFQ9UMX5 172 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 AP3M1Q9Y2T2 418 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 Q9Y3F1 56 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 CCL15-CCL14A0A0B4J2E2 113 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 RBM47A0AV96 593 aaKnown RBP6.06□□□□□ -1.44
RTTN-209ENST00000583043 TMEM114B3SHH9 223 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 C2CD2LO14523 706 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 SMIM24O75264 130 aa6.06□□□□□ -1.44
RTTN-209ENST00000583043 DAB1O75553 588 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms