RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 STBD1O95210 358 aa10.97□□□□□ -0.65
SS18-221ENST00000582448 IPO7O95373 1038 aaKnown RBP10.97□□□□□ -0.65
SS18-221ENST00000582448 GLUD1P00367 558 aa10.97□□□□□ -0.65
SS18-221ENST00000582448 SRGAP2CP0DJJ0 459 aa10.97□□□□□ -0.65
SS18-221ENST00000582448 HOXD13P35453 343 aa10.97□□□□□ -0.65
SS18-221ENST00000582448 NAMPTP43490 491 aa10.97□□□□□ -0.65
SS18-221ENST00000582448 ASPAP45381 313 aa10.97□□□□□ -0.65
SS18-221ENST00000582448 RAB27AP51159 221 aa10.97□□□□□ -0.65
SS18-221ENST00000582448 CYP2J2P51589 502 aa10.97□□□□□ -0.65
SS18-221ENST00000582448 ZBED6P86452 979 aa10.97□□□□□ -0.65
SS18-221ENST00000582448 INTS8Q75QN2 995 aaKnown RBP10.97□□□□□ -0.65
SS18-221ENST00000582448 SND1Q7KZF4 910 aaKnown RBP eCLIP10.97□□□□□ -0.65
SS18-221ENST00000582448 GET4Q7L5D6 327 aaPredicted RBP10.97□□□□□ -0.65
SS18-221ENST00000582448 ZNF410Q86VK4 478 aa10.97□□□□□ -0.65
SS18-221ENST00000582448 SULF2Q8IWU5 870 aa10.97□□□□□ -0.65
SS18-221ENST00000582448 C12orf56Q8IXR9 622 aa10.97□□□□□ -0.65
SS18-221ENST00000582448 XXYLT1Q8NBI6 393 aa10.97□□□□□ -0.65
SS18-221ENST00000582448 FIZ1Q96SL8 496 aa10.97□□□□□ -0.65
SS18-221ENST00000582448 STRA6Q9BX79 667 aa10.97□□□□□ -0.65
SS18-221ENST00000582448 SEMA6CQ9H3T2 930 aa10.97□□□□□ -0.65
SS18-221ENST00000582448 WDR6Q9NNW5 1121 aaKnown RBP10.97□□□□□ -0.65
SS18-221ENST00000582448 ABHD10Q9NUJ1 306 aa10.97□□□□□ -0.65
SS18-221ENST00000582448 ZMYM2Q9UBW7 1377 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 CLUHO75153 1309 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 LRRIQ4A6NIV6 560 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 MAFO75444 373 aaPredicted RBP10.96□□□□□ -0.65
SS18-221ENST00000582448 AKAP3O75969 853 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 SOD2P04179 222 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 TUBB4AP04350 444 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 SP9P0CG40 484 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 SRFP11831 508 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 EFNA5P52803 228 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 TFDP1Q14186 410 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 MXD4Q14582 209 aaPredicted RBP10.96□□□□□ -0.65
SS18-221ENST00000582448 PUM1Q14671 1186 aaKnown RBP eCLIP10.96□□□□□ -0.65
SS18-221ENST00000582448 ZC3H14Q6PJT7 736 aaKnown RBP10.96□□□□□ -0.65
SS18-221ENST00000582448 C1orf210Q8IVY1 113 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 TMEM161BQ8NDZ6 487 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 TMEM174Q8WUU8 243 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 RSPH1Q8WYR4 309 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 GATA6Q92908 595 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 RPS6KC1Q96S38 1066 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 TMEM175Q9BSA9 504 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 APOL6Q9BWW8 343 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 FOXQ1Q9C009 403 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 DHX33Q9H6R0 707 aaKnown RBP10.96□□□□□ -0.65
SS18-221ENST00000582448 KCND1Q9NSA2 647 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 STK39Q9UEW8 545 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 SSX2IPQ9Y2D8 614 aa10.96□□□□□ -0.65
SS18-221ENST00000582448 VPS13AQ96RL7 3174 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 IGKV6-21A0A0C4DH24 114 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.95□□□□□ -0.66
SS18-221ENST00000582448 TTC26A0AVF1 554 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 KIAA1324LA8MWY0 1029 aaPredicted RBP10.95□□□□□ -0.66
SS18-221ENST00000582448 K7ERI5 159 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 HNRNPDLO14979 420 aaKnown RBP10.95□□□□□ -0.66
SS18-221ENST00000582448 KIAA0391O15091 583 aaKnown RBP10.95□□□□□ -0.66
SS18-221ENST00000582448 MAPK13O15264 365 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 LRRN2O75325 713 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 FBXO24O75426 580 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 CCDC175P0C221 793 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 ITGA4P13612 1032 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 ARNTP27540 789 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 GSTT1P30711 240 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 GLUD2P49448 558 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 LIG4P49917 911 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 SLFN12LQ6IEE8 588 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 DCLRE1AQ6PJP8 1040 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 GBP6Q6ZN66 633 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 MRPL10Q7Z7H8 261 aaKnown RBP10.95□□□□□ -0.66
SS18-221ENST00000582448 FMNL3Q8IVF7 1028 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 ZBTB8OSQ8IWT0 167 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 CCAR2Q8N163 923 aaKnown RBP10.95□□□□□ -0.66
SS18-221ENST00000582448 CMASQ8NFW8 434 aaPredicted RBP10.95□□□□□ -0.66
SS18-221ENST00000582448 PSPC1Q8WXF1 523 aaKnown RBP10.95□□□□□ -0.66
SS18-221ENST00000582448 RUBCNQ92622 972 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 TMEM143Q96AN5 459 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 B3GALT6Q96L58 329 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 CEP89Q96ST8 783 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 DNAJC7Q99615 494 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 HERC2P3Q9BVR0 1158 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 YIPF2Q9BWQ6 316 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 C2orf40Q9H1Z8 148 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 KIAA1586Q9HCI6 787 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 XPNPEP1Q9NQW7 623 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 ARHGEF3Q9NR81 526 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 KRT82Q9NSB4 513 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 FAM207AQ9NSI2 230 aaPredicted RBP10.95□□□□□ -0.66
SS18-221ENST00000582448 AGPAT5Q9NUQ2 364 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 CRIM1Q9NZV1 1036 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 EPS15L1Q9UBC2 864 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 DPP7Q9UHL4 492 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 SPTBN4Q9H254 2564 aa10.95□□□□□ -0.66
SS18-221ENST00000582448 DCHS1Q96JQ0 3298 aa10.94□□□□□ -0.66
SS18-221ENST00000582448 GTPBP10A4D1E9 387 aaKnown RBP10.94□□□□□ -0.66
SS18-221ENST00000582448 F8W810 466 aa10.94□□□□□ -0.66
SS18-221ENST00000582448 ASAP2O43150 1006 aa10.94□□□□□ -0.66
SS18-221ENST00000582448 PAGE1O75459 146 aa10.94□□□□□ -0.66
SS18-221ENST00000582448 CYLC1P35663 651 aaPredicted RBP10.94□□□□□ -0.66
SS18-221ENST00000582448 ARL2P36404 184 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms