RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 PPP1R7Q15435 360 aa13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 MFSD5Q6N075 450 aa13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 CLEC20AQ6ZU45 233 aa13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 GPRIN1Q7Z2K8 1008 aa13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 TMC3Q7Z5M5 1100 aa13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 EIF1ADQ8N9N8 165 aaKnown RBP13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 BADQ92934 168 aa13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 PGLYRP2Q96PD5 576 aa13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 MYCBPQ99417 103 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 HNRNPABQ99729 332 aaKnown RBP13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 HEMGNQ9BXL5 484 aa13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 ADAM28Q9UKQ2 775 aa13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 SCINQ9Y6U3 715 aa13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 FAM187AA6NFU0 413 aa13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 KIAA0355O15063 1070 aa13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 AP1G2O75843 785 aa13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 DGKIO75912 1065 aa13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 PROSCO94903 275 aa13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 SHBGP04278 402 aa13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 ARPP19P56211 112 aa13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 BST2Q10589 180 aaKnown RBP13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 C15orf59Q2T9L4 293 aaPredicted RBP13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 SWT1Q5T5J6 900 aaKnown RBP13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 DUPD1Q68J44 220 aa13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 UBE2Q1Q7Z7E8 422 aa13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 METTL23Q86XA0 190 aa13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 ARFGAP1Q8N6T3 406 aa13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 ZMIZ2Q8NF64 920 aa13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 MYCBPAPQ8TBZ2 947 aa13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 KHSRPQ92945 711 aaKnown RBP eCLIP13.27□□□□□ -0.287e-8■■□□□ 13.1
CDK5RAP3-217ENST00000580287 MYLPFQ96A32 169 aa13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 SMOQ99835 787 aa13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 SLC4A5Q9BY07 1137 aa13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 DUSP16Q9BY84 665 aa13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 FAM124BQ9H5Z6 455 aaPredicted RBP13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 CEP290O15078 2479 aa13.27□□□□□ -0.28
CDK5RAP3-217ENST00000580287 SIGLEC16A6NMB1 481 aa13.27□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CYP11A1P05108 521 aa13.27□□□□□ -0.29
CDK5RAP3-217ENST00000580287 MYZAPP0CAP1 466 aa13.27□□□□□ -0.29
CDK5RAP3-217ENST00000580287 TFE3P19532 575 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-217ENST00000580287 GABRB2P47870 512 aa13.27□□□□□ -0.29
CDK5RAP3-217ENST00000580287 BCAT1P54687 386 aa13.27□□□□□ -0.29
CDK5RAP3-217ENST00000580287 IFFO1Q0D2I5 559 aa13.27□□□□□ -0.29
CDK5RAP3-217ENST00000580287 STILQ15468 1287 aa13.27□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CDO1Q16878 200 aa13.27□□□□□ -0.29
CDK5RAP3-217ENST00000580287 RSPO2Q6UXX9 243 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-217ENST00000580287 TMEM110Q86TL2 294 aa13.27□□□□□ -0.29
CDK5RAP3-217ENST00000580287 FAM35AQ86V20 835 aa13.27□□□□□ -0.29
CDK5RAP3-217ENST00000580287 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-217ENST00000580287 FBXO25Q8TCJ0 367 aa13.27□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ATG4AQ8WYN0 398 aa13.27□□□□□ -0.29
CDK5RAP3-217ENST00000580287 TOP1MTQ969P6 601 aa13.27□□□□□ -0.29
CDK5RAP3-217ENST00000580287 MCRS1Q96EZ8 462 aa13.27□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CDH9Q9ULB4 789 aa13.27□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ZBBXA8MT70 800 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 NPR3P17342 541 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 COILP38432 576 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 WDR5P61964 334 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ATP11AP98196 1134 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ADIGQ0VDE8 80 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 MTMR3Q13615 1198 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ZNF268Q14587 947 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ODF2Q5BJF6 829 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 KCNT1Q5JUK3 1230 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 VARS2Q5ST30 1063 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SPOUT1Q5T280 376 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SDHAF4Q5VUM1 108 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 OLFML1Q6UWY5 402 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ANKS1BQ7Z6G8 1248 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 MDM1Q8TC05 714 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SEC14L1Q92503 715 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CFAP57Q96MR6 1250 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 FAM118BQ9BPY3 351 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CXXC1Q9P0U4 656 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 STRIP2Q9ULQ0 834 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 NOVA2Q9UNW9 492 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PI4K2BG5E9Z4 385 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 C2CD2LO14523 706 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PARNO95453 639 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 FAM200BP0CF97 657 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CYP2F1P24903 491 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PSMA2P25787 234 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PCSK1P29120 753 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PTGIRP43119 386 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 RPL21P46778 160 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 IFRD2Q12894 506 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SMTNL2Q2TAL5 461 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SLC39A12Q504Y0 691 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 INTS6LQ5JSJ4 861 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 RTP2Q5QGT7 225 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 FBXW10Q5XX13 1052 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ZNF365Q70YC5 407 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CCDC25Q86WR0 208 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 C7orf61Q8IZ16 206 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CCDC114Q96M63 670 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ACBD6Q9BR61 282 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ADAM33Q9BZ11 813 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 TMBIM4Q9HC24 238 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PCSK1NQ9UHG2 260 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms