RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 O00370 1275 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 XPO1O14980 1071 aaKnown RBP11.47□□□□□ -0.57
NDEL1-208ENST00000580237 ADH1CP00326 375 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 TPM2P07951 284 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 ZDHHC11BP0C7U3 371 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 RARGP13631 454 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 BRD2P25440 801 aaKnown RBP11.47□□□□□ -0.57
NDEL1-208ENST00000580237 ATP5C1P36542 298 aaKnown RBP11.47□□□□□ -0.57
NDEL1-208ENST00000580237 USP8P40818 1118 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 TKTL1P51854 596 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 KIF11P52732 1056 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 MFAP3P55082 362 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 PDE4CQ08493 712 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 ADIGQ0VDE8 80 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 MTAPQ13126 283 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 STILQ15468 1287 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 STX1AQ16623 288 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 EXOC3L4Q17RC7 722 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 EML3Q32P44 896 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 CCDC183Q5T5S1 534 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 SNX30Q5VWJ9 437 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 TRIM65Q6PJ69 517 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 CCDC186Q7Z3E2 898 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 TTC30AQ86WT1 665 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 ARHGAP18Q8N392 663 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 UBR7Q8N806 425 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 LMO3Q8TAP4 145 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 FAM81BQ96LP2 452 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 CDK5RAP1Q96SZ6 601 aaKnown RBP11.47□□□□□ -0.57
NDEL1-208ENST00000580237 P2RY13Q9BPV8 354 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 UBE2TQ9NPD8 197 aaPredicted RBP11.47□□□□□ -0.57
NDEL1-208ENST00000580237 CYLDQ9NQC7 956 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 RBM12Q9NTZ6 932 aaKnown RBP11.47□□□□□ -0.57
NDEL1-208ENST00000580237 TBC1D14Q9P2M4 693 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 RASAL2Q9UJF2 1139 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 KIAA1257Q9ULG3 409 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 PIEZO1Q92508 2521 aa11.47□□□□□ -0.57
NDEL1-208ENST00000580237 E2F8A0AVK6 867 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 OTOL1A6NHN0 477 aaPredicted RBP11.46□□□□□ -0.57
NDEL1-208ENST00000580237 SHISA7A6NL88 538 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 KCNJ18B7U540 433 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 CYP17A1P05093 508 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 CHRNB1P11230 501 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 GJA4P35212 333 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 MRE11P49959 708 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 CCR3P51677 355 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 CSTF1Q05048 431 aaKnown RBP11.46□□□□□ -0.57
NDEL1-208ENST00000580237 KCNJ12Q14500 433 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 ARHGAP44Q17R89 818 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 Q6ZS52 159 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 ENOSF1Q7L5Y1 443 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 MIB1Q86YT6 1006 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 UBA3Q8TBC4 463 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 CD101Q93033 1021 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 MED15Q96RN5 788 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 PHOX2BQ99453 314 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 TUBGCP2Q9BSJ2 902 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 ULBP1Q9BZM6 244 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 NMUR1Q9HB89 426 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 ANO10Q9NW15 660 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 APEX2Q9UBZ4 518 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 DNMT3LQ9UJW3 386 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 NUDT5Q9UKK9 219 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 FBXO4Q9UKT5 387 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 STRIP2Q9ULQ0 834 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.46□□□□□ -0.57
NDEL1-208ENST00000580237 NFE2L3Q9Y4A8 694 aa11.46□□□□□ -0.57
NDEL1-208ENST00000580237 GTPBP10A4D1E9 387 aaKnown RBP11.45□□□□□ -0.58
NDEL1-208ENST00000580237 MDM4O15151 490 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 THAP12O43422 761 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 MED7O43513 233 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 ZBED1O96006 694 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 SP9P0CG40 484 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 ADH5P11766 374 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 LCP1P13796 627 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 EEF1GP26641 437 aaKnown RBP11.45□□□□□ -0.58
NDEL1-208ENST00000580237 PLA2G4AP47712 749 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 RGS7P49802 495 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 YWHAGP61981 247 aaKnown RBP eCLIP11.45□□□□□ -0.58
NDEL1-208ENST00000580237 ZXDBP98169 803 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 EFEMP1Q12805 493 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 TMEM196Q5HYL7 178 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 CT47A1Q5JQC4 288 aaPredicted RBP11.45□□□□□ -0.58
NDEL1-208ENST00000580237 BTBD8Q5XKL5 378 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 LCLAT1Q6UWP7 414 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 ALYREFQ86V81 257 aaKnown RBP11.45□□□□□ -0.58
NDEL1-208ENST00000580237 KIAA1958Q8N8K9 716 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 ANKRD20A12PQ8NF67 263 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 RNF139Q8WU17 664 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 TFAP2BQ92481 460 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 GOLGA1Q92805 767 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 SECISBP2LQ93073 1101 aaKnown RBP11.45□□□□□ -0.58
NDEL1-208ENST00000580237 NKD2Q969F2 451 aaPredicted RBP11.45□□□□□ -0.58
NDEL1-208ENST00000580237 OTUB2Q96DC9 234 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 CHFRQ96EP1 664 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 ZFRQ96KR1 1074 aaKnown RBP11.45□□□□□ -0.58
NDEL1-208ENST00000580237 KREMEN1Q96MU8 473 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 UBXN6Q9BZV1 441 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 LINC00597Q9H2U6 94 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 PRMT8Q9NR22 394 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms