RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 MARCH9Q86YJ5 346 aa20.62■□□□□ 0.89
LIMD2-209ENST00000580222 MLKLQ8NB16 471 aa20.62■□□□□ 0.89
LIMD2-209ENST00000580222 CCDC26Q8TAB7 109 aa20.62■□□□□ 0.89
LIMD2-209ENST00000580222 NOC3LQ8WTT2 800 aaKnown RBP20.62■□□□□ 0.89
LIMD2-209ENST00000580222 SPACA7Q96KW9 195 aa20.62■□□□□ 0.89
LIMD2-209ENST00000580222 PKMYT1Q99640 499 aa20.62■□□□□ 0.89
LIMD2-209ENST00000580222 CBWD1Q9BRT8 395 aa20.62■□□□□ 0.89
LIMD2-209ENST00000580222 CACNA2D2Q9NY47 1150 aa20.62■□□□□ 0.89
LIMD2-209ENST00000580222 BCCIPQ9P287 314 aaKnown RBP eCLIP20.62■□□□□ 0.89
LIMD2-209ENST00000580222 AGO2Q9UKV8 859 aaKnown RBP20.62■□□□□ 0.89
LIMD2-209ENST00000580222 ASXL3Q9C0F0 2248 aa20.62■□□□□ 0.89
LIMD2-209ENST00000580222 TNRC6BQ9UPQ9 1833 aaKnown RBP20.62■□□□□ 0.89
LIMD2-209ENST00000580222 CFAP46Q8IYW2 2715 aa20.62■□□□□ 0.89
LIMD2-209ENST00000580222 TENM4Q6N022 2769 aa20.61■□□□□ 0.89
LIMD2-209ENST00000580222 SYCE3A1L190 88 aa20.61■□□□□ 0.89
LIMD2-209ENST00000580222 CYSRT1A8MQ03 144 aa20.61■□□□□ 0.89
LIMD2-209ENST00000580222 PPP1R3GB7ZBB8 358 aa20.61■□□□□ 0.89
LIMD2-209ENST00000580222 ARHGAP33O14559 1287 aa20.61■□□□□ 0.89
LIMD2-209ENST00000580222 HCRTO43612 131 aa20.61■□□□□ 0.89
LIMD2-209ENST00000580222 GJB3O75712 270 aa20.61■□□□□ 0.89
LIMD2-209ENST00000580222 NFATC1O95644 943 aa20.61■□□□□ 0.89
LIMD2-209ENST00000580222 HDCP19113 662 aa20.61■□□□□ 0.89
LIMD2-209ENST00000580222 ACAT1P24752 427 aaKnown RBP20.61■□□□□ 0.89
LIMD2-209ENST00000580222 ACOT2P49753 483 aa20.61■□□□□ 0.89
LIMD2-209ENST00000580222 TAF6P49848 677 aa20.61■□□□□ 0.89
LIMD2-209ENST00000580222 ADGRG2Q8IZP9 1017 aa20.61■□□□□ 0.89
LIMD2-209ENST00000580222 DHTKD1Q96HY7 919 aaPredicted RBP20.61■□□□□ 0.89
LIMD2-209ENST00000580222 PCIF1Q9H4Z3 704 aa20.61■□□□□ 0.89
LIMD2-209ENST00000580222 DNAAF2Q9NVR5 837 aaKnown RBP20.61■□□□□ 0.89
LIMD2-209ENST00000580222 ANO10Q9NW15 660 aa20.61■□□□□ 0.89
LIMD2-209ENST00000580222 DPP3Q9NY33 737 aa20.61■□□□□ 0.89
LIMD2-209ENST00000580222 ARHGAP26Q9UNA1 814 aa20.61■□□□□ 0.89
LIMD2-209ENST00000580222 TRAF3IP3Q9Y228 551 aa20.61■□□□□ 0.89
LIMD2-209ENST00000580222 DENND4CQ5VZ89 1909 aa20.61■□□□□ 0.89
LIMD2-209ENST00000580222 TCRBV21S2A2A0A5A6 115 aa20.6■□□□□ 0.89
LIMD2-209ENST00000580222 KPNA7A9QM74 516 aa20.6■□□□□ 0.89
LIMD2-209ENST00000580222 PRB1P04280 392 aa20.6■□□□□ 0.89
LIMD2-209ENST00000580222 TCF3P15923 654 aa20.6■□□□□ 0.89
LIMD2-209ENST00000580222 ADSSP30520 456 aa20.6■□□□□ 0.89
LIMD2-209ENST00000580222 HOXD12P35452 270 aa20.6■□□□□ 0.89
LIMD2-209ENST00000580222 CYP2J2P51589 502 aa20.6■□□□□ 0.89
LIMD2-209ENST00000580222 PAK1Q13153 545 aa20.6■□□□□ 0.89
LIMD2-209ENST00000580222 KYAT1Q16773 422 aa20.6■□□□□ 0.89
LIMD2-209ENST00000580222 SLC41A1Q8IVJ1 513 aa20.6■□□□□ 0.89
LIMD2-209ENST00000580222 NELFBQ8WX92 580 aa20.6■□□□□ 0.89
LIMD2-209ENST00000580222 SAAL1Q96ER3 474 aa20.6■□□□□ 0.89
LIMD2-209ENST00000580222 HSPBP1Q9NZL4 362 aa20.6■□□□□ 0.89
LIMD2-209ENST00000580222 GTF3C4Q9UKN8 822 aa20.6■□□□□ 0.89
LIMD2-209ENST00000580222 ACACAQ13085 2346 aa20.6■□□□□ 0.89
LIMD2-209ENST00000580222 PCDH15Q96QU1 1955 aa20.59■□□□□ 0.89
LIMD2-209ENST00000580222 OBSL1O75147 1896 aa20.59■□□□□ 0.89
LIMD2-209ENST00000580222 TRIM49BA6NDI0 452 aa20.59■□□□□ 0.89
LIMD2-209ENST00000580222 LEFTY2O00292 366 aa20.59■□□□□ 0.89
LIMD2-209ENST00000580222 KIAA0391O15091 583 aaKnown RBP20.59■□□□□ 0.89
LIMD2-209ENST00000580222 KAT7O95251 611 aa20.59■□□□□ 0.89
LIMD2-209ENST00000580222 LDHAP00338 332 aaKnown RBP20.59■□□□□ 0.89
LIMD2-209ENST00000580222 RPL6Q02878 288 aaKnown RBP20.59■□□□□ 0.89
LIMD2-209ENST00000580222 LRRC63Q05C16 580 aa20.59■□□□□ 0.89
LIMD2-209ENST00000580222 TYRO3Q06418 890 aa20.59■□□□□ 0.89
LIMD2-209ENST00000580222 DHCR24Q15392 516 aa20.59■□□□□ 0.89
LIMD2-209ENST00000580222 ZSCAN23Q3MJ62 389 aa20.59■□□□□ 0.89
LIMD2-209ENST00000580222 FILIP1Q7Z7B0 1213 aa20.59■□□□□ 0.89
LIMD2-209ENST00000580222 CD302Q8IX05 232 aa20.59■□□□□ 0.89
LIMD2-209ENST00000580222 C12orf56Q8IXR9 622 aa20.59■□□□□ 0.89
LIMD2-209ENST00000580222 PGBD3Q8N328 593 aa20.59■□□□□ 0.89
LIMD2-209ENST00000580222 GPD1LQ8N335 351 aa20.59■□□□□ 0.89
LIMD2-209ENST00000580222 PDCL2Q8N4E4 241 aa20.59■□□□□ 0.89
LIMD2-209ENST00000580222 CEP76Q8TAP6 659 aa20.59■□□□□ 0.89
LIMD2-209ENST00000580222 POLMQ9NP87 494 aaPredicted RBP20.59■□□□□ 0.89
LIMD2-209ENST00000580222 UXTQ9UBK9 157 aaPredicted RBP20.59■□□□□ 0.89
LIMD2-209ENST00000580222 HCN2Q9UL51 889 aa20.59■□□□□ 0.89
LIMD2-209ENST00000580222 DERAQ9Y315 318 aa20.59■□□□□ 0.89
LIMD2-209ENST00000580222 SCN1AP35498 2009 aa20.59■□□□□ 0.89
LIMD2-209ENST00000580222 ADAMTS9Q9P2N4 1935 aa20.59■□□□□ 0.89
LIMD2-209ENST00000580222 ANK1P16157 1881 aa20.58■□□□□ 0.89
LIMD2-209ENST00000580222 A0A0A0MRY4 1105 aa20.58■□□□□ 0.89
LIMD2-209ENST00000580222 BICDL2A1A5D9 508 aa20.58■□□□□ 0.89
LIMD2-209ENST00000580222 GOLGA8IPA6NC78 632 aa20.58■□□□□ 0.89
LIMD2-209ENST00000580222 GOLGA8JA6NMD2 632 aa20.58■□□□□ 0.89
LIMD2-209ENST00000580222 NR3C1P04150 777 aa20.58■□□□□ 0.89
LIMD2-209ENST00000580222 STX17P56962 302 aa20.58■□□□□ 0.89
LIMD2-209ENST00000580222 RPL10AP62906 217 aaKnown RBP20.58■□□□□ 0.89
LIMD2-209ENST00000580222 ZNF33AQ06730 810 aa20.58■□□□□ 0.89
LIMD2-209ENST00000580222 NFE2Q16621 373 aaPredicted RBP20.58■□□□□ 0.89
LIMD2-209ENST00000580222 ZCWPW2Q504Y3 356 aa20.58■□□□□ 0.89
LIMD2-209ENST00000580222 RHBDF2Q6PJF5 856 aa20.58■□□□□ 0.89
LIMD2-209ENST00000580222 OSTM1Q86WC4 334 aa20.58■□□□□ 0.89
LIMD2-209ENST00000580222 FAM84AQ96KN4 292 aa20.58■□□□□ 0.89
LIMD2-209ENST00000580222 PNKPQ96T60 521 aa20.58■□□□□ 0.89
LIMD2-209ENST00000580222 FAM213AQ9BRX8 229 aa20.58■□□□□ 0.89
LIMD2-209ENST00000580222 RNF38Q9H0F5 515 aa20.58■□□□□ 0.89
LIMD2-209ENST00000580222 L1RE1Q9UN81 338 aa20.58■□□□□ 0.89
LIMD2-209ENST00000580222 PI4KAP42356 2102 aa20.57■□□□□ 0.88
LIMD2-209ENST00000580222 EXOC3O60645 756 aa20.57■□□□□ 0.88
LIMD2-209ENST00000580222 GABRG2P18507 467 aa20.57■□□□□ 0.88
LIMD2-209ENST00000580222 NR2F2P24468 414 aa20.57■□□□□ 0.88
LIMD2-209ENST00000580222 PMS1P54277 932 aaKnown RBP20.57■□□□□ 0.88
LIMD2-209ENST00000580222 WNT7BP56706 349 aa20.57■□□□□ 0.88
LIMD2-209ENST00000580222 USP46P62068 366 aa20.57■□□□□ 0.88
LIMD2-209ENST00000580222 TSPY1Q01534 308 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms