RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 POMCP01189 267 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 SSBP05455 408 aaKnown RBP eCLIP4.4□□□□□ -1.71
DDX42-211ENST00000580108 RB1P06400 928 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 GCFC2P16383 781 aaKnown RBP4.4□□□□□ -1.71
DDX42-211ENST00000580108 ZNF28P17035 718 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 ZSCAN20P17040 1043 aaPredicted RBP4.4□□□□□ -1.71
DDX42-211ENST00000580108 XBP1P17861 261 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 GLRA2P23416 452 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 TMOD1P28289 359 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 HOXA11P31270 313 aaPredicted RBP4.4□□□□□ -1.71
DDX42-211ENST00000580108 YWHABP31946 246 aaKnown RBP4.4□□□□□ -1.71
DDX42-211ENST00000580108 CA8P35219 290 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 ARL2P36404 184 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 TECP42680 631 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 SLC11A1P49279 550 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 RARRES1P49788 294 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 NDUFV1P49821 464 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 BCAR1P56945 870 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 ADAM15Q13444 863 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 CAPSQ13938 189 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 TRIM29Q14134 588 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 CDSNQ15517 529 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 KCNT2Q6UVM3 1135 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 TAS1R1Q7RTX1 841 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 KCNK18Q7Z418 384 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 MILR1Q7Z6M3 343 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 NT5DC4Q86YG4 428 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 FAM178BQ8IXR5 827 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 C4orf19Q8IY42 314 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 LGI4Q8N135 537 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 SLC39A11Q8N1S5 342 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 C12orf76Q8N812 135 aaPredicted RBP4.4□□□□□ -1.71
DDX42-211ENST00000580108 C4orf32Q8N8J7 132 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 MICAL1Q8TDZ2 1067 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 LRRC15Q8TF66 581 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 BTN2A2Q8WVV5 523 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 WASF1Q92558 559 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 MBD6Q96DN6 1003 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 PABPC5Q96DU9 382 aaKnown RBP4.4□□□□□ -1.71
DDX42-211ENST00000580108 B3GALT6Q96L58 329 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 FAM20AQ96MK3 541 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 ZNF558Q96NG5 402 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 HSD17B14Q9BPX1 270 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 KIFC3Q9BVG8 833 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 GCOM2Q9BZD3 368 aaPredicted RBP4.4□□□□□ -1.71
DDX42-211ENST00000580108 TMEM117Q9H0C3 514 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 SMOC2Q9H3U7 446 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 NRDE2Q9H7Z3 1164 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 TLE6Q9H808 572 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 PCDH18Q9HCL0 1135 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 C1orf112Q9NSG2 853 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 TBC1D13Q9NVG8 400 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 MIOSQ9NXC5 875 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 PCDHA12Q9UN75 941 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 COG5Q9UP83 839 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.4□□□□□ -1.71
DDX42-211ENST00000580108 PRG3Q9Y2Y8 225 aaPredicted RBP4.4□□□□□ -1.71
DDX42-211ENST00000580108 PCDHB2Q9Y5E7 798 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 X6R8D5 127 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 DENND4AQ7Z401 1863 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 TECTAO75443 2155 aa4.4□□□□□ -1.71
DDX42-211ENST00000580108 PDCD11Q14690 1871 aaKnown RBP4.39□□□□□ -1.71
DDX42-211ENST00000580108 COL4A3Q01955 1670 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 A0A0U1RQF3 1178 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 E9PMD0 336 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 INO80B-WBP1J3KQ70 363 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 TBX3O15119 743 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 CLASP2O75122 1294 aaKnown RBP4.39□□□□□ -1.71
DDX42-211ENST00000580108 BAG4O95429 457 aaKnown RBP4.39□□□□□ -1.71
DDX42-211ENST00000580108 NPTXRO95502 500 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 RPLP2P05387 115 aaKnown RBP4.39□□□□□ -1.71
DDX42-211ENST00000580108 OR52Z1P0C646 297 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 EPCAMP16422 314 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 ARF4P18085 180 aaPredicted RBP4.39□□□□□ -1.71
DDX42-211ENST00000580108 LAG3P18627 525 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 SFPQP23246 707 aaKnown RBP eCLIP4.39□□□□□ -1.71
DDX42-211ENST00000580108 AKAP5P24588 427 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 GJB2P29033 226 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 RBM25P49756 843 aaKnown RBP4.39□□□□□ -1.71
DDX42-211ENST00000580108 DNM2P50570 870 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 SCNN1GP51170 649 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 ZNF143P52747 638 aaPredicted RBP4.39□□□□□ -1.71
DDX42-211ENST00000580108 PTENP60484 403 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 GRIN1Q05586 938 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 MBTD1Q05BQ5 628 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 ZRSR1Q15695 479 aaKnown RBP4.39□□□□□ -1.71
DDX42-211ENST00000580108 DUSP6Q16828 381 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 AAK1Q2M2I8 961 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 FAM173BQ6P4H8 233 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 SYCE2Q6PIF2 218 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 POMZP3Q6PJE2 187 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 ZNF410Q86VK4 478 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 ZC3H18Q86VM9 953 aaKnown RBP4.39□□□□□ -1.71
DDX42-211ENST00000580108 CATSPER3Q86XQ3 398 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 NOSTRINQ8IVI9 506 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 LRRC43Q8N309 656 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 EFHBQ8N7U6 833 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 FAM184AQ8NB25 1140 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 SLC16A11Q8NCK7 471 aa4.39□□□□□ -1.71
DDX42-211ENST00000580108 KREMEN2Q8NCW0 462 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms