RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 C10orf76Q5T2E6 689 aa12.99□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SFR1Q86XK3 245 aa12.99□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SLC41A1Q8IVJ1 513 aa12.99□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SYCP3Q8IZU3 236 aa12.99□□□□□ -0.33
CDK5RAP3-216ENST00000579853 DEFB119Q8N690 84 aa12.99□□□□□ -0.33
CDK5RAP3-216ENST00000579853 KBTBD7Q8WVZ9 684 aa12.99□□□□□ -0.33
CDK5RAP3-216ENST00000579853 COL26A1Q96A83 441 aa12.99□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SAAL1Q96ER3 474 aa12.99□□□□□ -0.33
CDK5RAP3-216ENST00000579853 PCED1BQ96HM7 432 aa12.99□□□□□ -0.33
CDK5RAP3-216ENST00000579853 MTMR12Q9C0I1 747 aa12.99□□□□□ -0.33
CDK5RAP3-216ENST00000579853 ELOVL4Q9GZR5 314 aa12.99□□□□□ -0.33
CDK5RAP3-216ENST00000579853 ZDHHC4Q9NPG8 344 aa12.99□□□□□ -0.33
CDK5RAP3-216ENST00000579853 CRTAC1Q9NQ79 661 aa12.99□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SPHK2Q9NRA0 654 aa12.99□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SH3BP1Q9Y3L3 701 aa12.99□□□□□ -0.33
CDK5RAP3-216ENST00000579853 H3BQV1 296 aa12.98□□□□□ -0.33
CDK5RAP3-216ENST00000579853 HCRTO43612 131 aa12.98□□□□□ -0.33
CDK5RAP3-216ENST00000579853 PDGFRBP09619 1106 aa12.98□□□□□ -0.33
CDK5RAP3-216ENST00000579853 LMO2P25791 158 aa12.98□□□□□ -0.33
CDK5RAP3-216ENST00000579853 TUBP50607 506 aa12.98□□□□□ -0.33
CDK5RAP3-216ENST00000579853 WNT7BP56706 349 aa12.98□□□□□ -0.33
CDK5RAP3-216ENST00000579853 DUOXA2Q1HG44 320 aa12.98□□□□□ -0.33
CDK5RAP3-216ENST00000579853 TOGARAM2Q6ZUX3 1019 aa12.98□□□□□ -0.33
CDK5RAP3-216ENST00000579853 CHPFQ8IZ52 775 aa12.98□□□□□ -0.33
CDK5RAP3-216ENST00000579853 MMS19Q96T76 1030 aa12.98□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SNX25Q9H3E2 840 aa12.98□□□□□ -0.33
CDK5RAP3-216ENST00000579853 PDE11AQ9HCR9 933 aa12.98□□□□□ -0.33
CDK5RAP3-216ENST00000579853 OLFML3Q9NRN5 406 aa12.98□□□□□ -0.33
CDK5RAP3-216ENST00000579853 INTS13Q9NVM9 706 aa12.98□□□□□ -0.33
CDK5RAP3-216ENST00000579853 STK17AQ9UEE5 414 aa12.98□□□□□ -0.33
CDK5RAP3-216ENST00000579853 CYP8B1Q9UNU6 501 aa12.98□□□□□ -0.33
CDK5RAP3-216ENST00000579853 PLXNB3Q9ULL4 1909 aa12.98□□□□□ -0.33
CDK5RAP3-216ENST00000579853 A0A1W2PQF6 199 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 GFRA2O00451 464 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SCAMP3O14828 347 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 TACC1O75410 805 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 GCNT3O95395 438 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 ZNF883P0CG24 379 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 NDUFV2P19404 249 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 YWHAQP27348 245 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 GNL1P36915 607 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 KCNA1Q09470 495 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 ANO4Q32M45 955 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 MDH1BQ5I0G3 518 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 HECTD3Q5T447 861 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 GRAMD4Q6IC98 578 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 IL27RAQ6UWB1 636 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 HS2ST1Q7LGA3 356 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 DYMQ7RTS9 669 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 NUP93Q8N1F7 819 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 GPD1LQ8N335 351 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 NAT16Q8N8M0 369 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 PNPLA1Q8N8W4 532 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 GLIS3Q8NEA6 775 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 OR2I1PQ8NGU4 316 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 IPO4Q8TEX9 1081 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 NOC3LQ8WTT2 800 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 FBXO32Q969P5 355 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 CAMK1GQ96NX5 476 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 XPO6Q96QU8 1125 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 KIF2CQ99661 725 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 GABRG3Q99928 467 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 IKZF4Q9H2S9 585 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 CCDC39Q9UFE4 941 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 MGAQ8IWI9 3026 aa12.97□□□□□ -0.33
CDK5RAP3-216ENST00000579853 PTPRQQ9UMZ3 2332 aa12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 A0A1B0GTW7 788 aa12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 GOLGA8IPA6NC78 632 aa12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 ZNF233A6NK53 670 aa12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 GOLGA8JA6NMD2 632 aa12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 COCHO43405 550 aa12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 PRPF6O94906 941 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 CER1O95813 267 aa12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 PTPN1P18031 435 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 GRIK2Q13002 908 aa12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SNX30Q5VWJ9 437 aa12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SV2BQ7L1I2 683 aa12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 TMPRSS7Q7RTY8 843 aa12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 METTL3Q86U44 580 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 GALNT15Q8N3T1 639 aa12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SPRYD3Q8NCJ5 442 aa12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 ZSWIM2Q8NEG5 633 aa12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 MDM1Q8TC05 714 aa12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 SCFD1Q8WVM8 642 aa12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 HNRNPLLQ8WVV9 542 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 ZFRQ96KR1 1074 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 CDC6Q99741 560 aa12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 CD248Q9HCU0 757 aa12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 WDR35Q9P2L0 1181 aa12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 PCOLCE2Q9UKZ9 415 aa12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 RAXQ9Y2V3 346 aa12.96□□□□□ -0.33
CDK5RAP3-216ENST00000579853 PTPRBP23467 1997 aa12.96□□□□□ -0.34
CDK5RAP3-216ENST00000579853 ATMQ13315 3056 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 ATP8B3O60423 1300 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 CBFA2T3O75081 653 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 CD6P30203 668 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 WASP42768 502 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 ZNF132P52740 706 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 IFRD2Q12894 506 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 STARD3Q14849 445 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms