RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 LINC00301Q8NCQ3 95 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 FOXJ1Q92949 421 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 FGFBP2Q9BYJ0 223 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 PCED1AQ9H1Q7 454 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 CAPN10Q9HC96 672 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 TLR8Q9NR97 1041 aaKnown RBP11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 COCHO43405 550 aa11.9□□□□□ -0.5
SMARCE1-214ENST00000578112 C7P10643 843 aa11.9□□□□□ -0.5
SMARCE1-214ENST00000578112 HOXD13P35453 343 aa11.9□□□□□ -0.5
SMARCE1-214ENST00000578112 ASIC1P78348 528 aa11.9□□□□□ -0.5
SMARCE1-214ENST00000578112 IRX4P78413 519 aa11.9□□□□□ -0.5
SMARCE1-214ENST00000578112 GFPT1Q06210 699 aaPredicted RBP11.9□□□□□ -0.5
SMARCE1-214ENST00000578112 FOXC1Q12948 553 aa11.9□□□□□ -0.5
SMARCE1-214ENST00000578112 STK38Q15208 465 aa11.9□□□□□ -0.5
SMARCE1-214ENST00000578112 WDR72Q3MJ13 1102 aa11.9□□□□□ -0.5
SMARCE1-214ENST00000578112 ZNF667Q5HYK9 610 aa11.9□□□□□ -0.5
SMARCE1-214ENST00000578112 CCDC33Q8N5R6 958 aa11.9□□□□□ -0.5
SMARCE1-214ENST00000578112 USP28Q96RU2 1077 aa11.9□□□□□ -0.5
SMARCE1-214ENST00000578112 ZNF518BQ9C0D4 1074 aa11.9□□□□□ -0.5
SMARCE1-214ENST00000578112 CYLDQ9NQC7 956 aa11.9□□□□□ -0.5
SMARCE1-214ENST00000578112 ZMIZ1Q9ULJ6 1067 aa11.9□□□□□ -0.5
SMARCE1-214ENST00000578112 A0A087X0B3 334 aa11.9□□□□□ -0.51
SMARCE1-214ENST00000578112 TCRBV21S2A2A0A5A6 115 aa11.9□□□□□ -0.51
SMARCE1-214ENST00000578112 SPTLC2O15270 562 aa11.9□□□□□ -0.51
SMARCE1-214ENST00000578112 HCRTO43612 131 aa11.9□□□□□ -0.51
SMARCE1-214ENST00000578112 OPHN1O60890 802 aa11.9□□□□□ -0.51
SMARCE1-214ENST00000578112 ADAM23O75077 832 aa11.9□□□□□ -0.51
SMARCE1-214ENST00000578112 MYL1P05976 194 aa11.9□□□□□ -0.51
SMARCE1-214ENST00000578112 ENGP17813 658 aa11.9□□□□□ -0.51
SMARCE1-214ENST00000578112 TIE1P35590 1138 aa11.9□□□□□ -0.51
SMARCE1-214ENST00000578112 SLC6A11P48066 632 aa11.9□□□□□ -0.51
SMARCE1-214ENST00000578112 LY6G5CQ5SRR4 150 aa11.9□□□□□ -0.51
SMARCE1-214ENST00000578112 TTC39CQ8N584 583 aa11.9□□□□□ -0.51
SMARCE1-214ENST00000578112 ZNF513Q8N8E2 541 aaPredicted RBP11.9□□□□□ -0.51
SMARCE1-214ENST00000578112 TMC2Q8TDI7 906 aa11.9□□□□□ -0.51
SMARCE1-214ENST00000578112 USP25Q9UHP3 1055 aa11.9□□□□□ -0.51
SMARCE1-214ENST00000578112 MTMR6Q9Y217 621 aa11.9□□□□□ -0.51
SMARCE1-214ENST00000578112 CST3P01034 146 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 ZNF883P0CG24 379 aa11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 SLC5A3P53794 718 aa11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 KNOP1Q1ED39 458 aaKnown RBP11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 SGSM1Q2NKQ1 1148 aa11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 ZNF699Q32M78 642 aa11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 SYCP2LQ5T4T6 812 aa11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 NOC3LQ8WTT2 800 aaKnown RBP11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 KLF16Q9BXK1 252 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 IRX2Q9BZI1 471 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 TFIP11Q9UBB9 837 aaKnown RBP11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 SCML2Q9UQR0 700 aa11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 NME7Q9Y5B8 376 aa11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 DCHS1Q96JQ0 3298 aa11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 TBC1D3BA6NDS4 549 aa11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 PHACTR2O75167 634 aa11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 TULP3O75386 442 aa11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 DLATP10515 647 aaKnown RBP11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 HOXB2P14652 356 aa11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 ATXN3P54252 364 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 NFIL3Q16649 462 aa11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 CCDC142Q17RM4 750 aa11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 WDR45BQ5MNZ6 344 aa11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 C12orf40Q86WS4 652 aa11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 SCFD1Q8WVM8 642 aa11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 MED10Q9BTT4 135 aa11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 BACH2Q9BYV9 841 aa11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 CYP3A43Q9HB55 503 aa11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 CD248Q9HCU0 757 aa11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 POLR3BQ9NW08 1133 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-214ENST00000578112 NCOR2Q9Y618 2525 aa11.88□□□□□ -0.51
SMARCE1-214ENST00000578112 IKBKBO14920 756 aa11.88□□□□□ -0.51
SMARCE1-214ENST00000578112 STX6O43752 255 aa11.88□□□□□ -0.51
SMARCE1-214ENST00000578112 KIF20AO95235 890 aa11.88□□□□□ -0.51
SMARCE1-214ENST00000578112 GNSP15586 552 aa11.88□□□□□ -0.51
SMARCE1-214ENST00000578112 GABRG2P18507 467 aa11.88□□□□□ -0.51
SMARCE1-214ENST00000578112 OXTRP30559 389 aa11.88□□□□□ -0.51
SMARCE1-214ENST00000578112 MYL6P60660 151 aa11.88□□□□□ -0.51
SMARCE1-214ENST00000578112 KDSRQ06136 332 aa11.88□□□□□ -0.51
SMARCE1-214ENST00000578112 C10orf76Q5T2E6 689 aa11.88□□□□□ -0.51
SMARCE1-214ENST00000578112 ZNF419Q96HQ0 510 aaPredicted RBP11.88□□□□□ -0.51
SMARCE1-214ENST00000578112 DCLK3Q9C098 648 aa11.88□□□□□ -0.51
SMARCE1-214ENST00000578112 DMAC2Q9NW81 257 aa11.88□□□□□ -0.51
SMARCE1-214ENST00000578112 FAM13BQ9NYF5 915 aa11.88□□□□□ -0.51
SMARCE1-214ENST00000578112 FBXO10Q9UK96 956 aa11.88□□□□□ -0.51
SMARCE1-214ENST00000578112 SLC27A6Q9Y2P4 619 aa11.88□□□□□ -0.51
SMARCE1-214ENST00000578112 PCDHGB2Q9Y5G2 931 aa11.88□□□□□ -0.51
SMARCE1-214ENST00000578112 IGHV1OR15-9A0A0B4J2B8 117 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 C1QTNF9BB2RNN3 333 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 ARHGAP33O14559 1287 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 C4BPAP04003 597 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 C1QTNF9P0C862 333 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 ATP5C1P36542 298 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 PLA2G4AP47712 749 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 MCCD1P59942 119 aaPredicted RBP11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 GLRX5Q86SX6 157 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 PGBD3Q8N328 593 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 DEFB124Q8NES8 71 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 CADM4Q8NFZ8 388 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 PARD3BQ8TEW8 1205 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 HMGB4Q8WW32 186 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 ZNF516Q92618 1163 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 UBXN6Q9BZV1 441 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms