RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 GOLGA7BQ2TAP0 167 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 N4BP2L1Q5TBK1 243 aaPredicted RBP10.72□□□□□ -0.69
PTPRM-205ENST00000577827 C12orf56Q8IXR9 622 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 UBA3Q8TBC4 463 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 PIWIL2Q8TC59 973 aaKnown RBP10.72□□□□□ -0.69
PTPRM-205ENST00000577827 NEUROG2Q9H2A3 272 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 SP110Q9HB58 689 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.72□□□□□ -0.69
PTPRM-205ENST00000577827 CHADO15335 359 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 TRIM13O60858 407 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 ME2P23368 584 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 ATXN3P54252 364 aaPredicted RBP10.71□□□□□ -0.69
PTPRM-205ENST00000577827 BMPR2Q13873 1038 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 ZBTB49Q6ZSB9 765 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 LPCAT2Q7L5N7 544 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 ATPAF2Q8N5M1 289 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 STKLD1Q8NE28 680 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 APPL2Q8NEU8 664 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 SNRNP27Q8WVK2 155 aaKnown RBP10.71□□□□□ -0.69
PTPRM-205ENST00000577827 MKL1Q969V6 931 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 MTMR12Q9C0I1 747 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 LGALS13Q9UHV8 139 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 MAGEB16A2A368 324 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 E9PBE3 544 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 KLHL41O60662 606 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 HMOX2P30519 316 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 ATICP31939 592 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 CHN2P52757 468 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 GTF2BQ00403 316 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 MTMR2Q13614 643 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 CAPRIN1Q14444 709 aaKnown RBP10.71□□□□□ -0.69
PTPRM-205ENST00000577827 C4orf50Q6ZRC1 276 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 C15orf52Q6ZUT6 534 aaKnown RBP10.71□□□□□ -0.69
PTPRM-205ENST00000577827 SEPT12Q8IYM1 358 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 C12orf50Q8NA57 414 aaPredicted RBP10.71□□□□□ -0.69
PTPRM-205ENST00000577827 TDRD5Q8NAT2 981 aaKnown RBP10.71□□□□□ -0.69
PTPRM-205ENST00000577827 CYP2W1Q8TAV3 490 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 ZNF483Q8TF39 744 aaPredicted RBP10.71□□□□□ -0.69
PTPRM-205ENST00000577827 FAM210AQ96ND0 272 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 RIC8BQ9NVN3 520 aa10.71□□□□□ -0.69
PTPRM-205ENST00000577827 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.71□□□□□ -0.69
PTPRM-205ENST00000577827 FAM208AQ9UK61 1670 aaKnown RBP10.71□□□□□ -0.7
PTPRM-205ENST00000577827 E5RI56 91 aa10.71□□□□□ -0.7
PTPRM-205ENST00000577827 KRT36O76013 467 aa10.71□□□□□ -0.7
PTPRM-205ENST00000577827 KRT8P05787 483 aa10.71□□□□□ -0.7
PTPRM-205ENST00000577827 RPL5P46777 297 aaKnown RBP10.71□□□□□ -0.7
PTPRM-205ENST00000577827 PTPN11Q06124 597 aaPredicted RBP10.71□□□□□ -0.7
PTPRM-205ENST00000577827 DPYSL3Q14195 570 aa10.71□□□□□ -0.7
PTPRM-205ENST00000577827 DENND1BQ6P3S1 775 aa10.71□□□□□ -0.7
PTPRM-205ENST00000577827 RMND5BQ96G75 393 aaPredicted RBP10.71□□□□□ -0.7
PTPRM-205ENST00000577827 SLITRK1Q96PX8 696 aa10.71□□□□□ -0.7
PTPRM-205ENST00000577827 UBE2OQ9C0C9 1292 aaKnown RBP10.71□□□□□ -0.7
PTPRM-205ENST00000577827 ITGB1BP2Q9UKP3 347 aa10.71□□□□□ -0.7
PTPRM-205ENST00000577827 SLC12A4Q9UP95 1085 aa10.71□□□□□ -0.7
PTPRM-205ENST00000577827 PPME1Q9Y570 386 aa10.71□□□□□ -0.7
PTPRM-205ENST00000577827 ASB14A6NK59 587 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 TGFB1I1O43294 461 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 ANPEPP15144 967 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 CDC25CP30307 473 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 SERPINB1P30740 379 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 TTKP33981 857 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 DEFA1P59665 94 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 DEFA3P59666 94 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 GRTP1Q5TC63 336 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 OTOAQ7RTW8 1153 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 IFNEQ86WN2 208 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 APOBEC3FQ8IUX4 373 aaKnown RBP10.7□□□□□ -0.7
PTPRM-205ENST00000577827 PLD3Q8IV08 490 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 SLC25A41Q8N5S1 370 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 OR6Y1Q8NGX8 325 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 SCN3BQ9NY72 215 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 LZTS1Q9Y250 596 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 GAKO14976 1311 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 DFFAO00273 331 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 HBP1O60381 514 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 PSMD10O75832 226 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 GJB6O95452 261 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 SUPT20HL2P0C7V6 817 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 S100A5P33763 92 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 NR2C2P49116 596 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 ILF2Q12905 390 aaKnown RBP10.7□□□□□ -0.7
PTPRM-205ENST00000577827 MPP3Q13368 585 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 DENND5BQ6ZUT9 1274 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 POLNQ7Z5Q5 900 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 DHDDSQ86SQ9 333 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 UNC45BQ8IWX7 931 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 KIAA2013Q8IYS2 634 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 FITM2Q8N6M3 262 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.7□□□□□ -0.7
PTPRM-205ENST00000577827 ACMSDQ8TDX5 336 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 FAM172AQ8WUF8 416 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 RXFP2Q8WXD0 754 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 WNK4Q96J92 1243 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 PRDM16Q9HAZ2 1276 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 ERVK-5Q9HDB9 667 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 SLCO1B3Q9NPD5 702 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 HEATR9A2RTY3 570 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 SMIM22K7EJ46 135 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 USP1O94782 785 aa10.7□□□□□ -0.7
PTPRM-205ENST00000577827 MAMLD1Q13495 774 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms