RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 KCNF1Q9H3M0 494 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 DMAP1Q9NPF5 467 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CYTH4Q9UIA0 394 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 FBXW11Q9UKB1 542 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 MTCL1Q9Y4B5 1905 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SOWAHDA6NJG2 315 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 NCANO14594 1321 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 AKR1B10O60218 316 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 AP1G2O75843 785 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SEC24AO95486 1093 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 KLRC2P26717 231 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SCNN1AP37088 669 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CACNA2D1P54289 1103 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 RPL10AP62906 217 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SHC2P98077 582 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 RBM10P98175 930 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 C1QBPQ07021 282 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ZNF268Q14587 947 aaPredicted RBP11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 TAF3Q5VWG9 929 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PLPP4Q5VZY2 271 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ANKRD54Q6NXT1 300 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CCDC149Q6ZUS6 474 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ARCQ7LC44 396 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ZDHHC17Q8IUH5 632 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ZDHHC14Q8IZN3 488 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 UBA3Q8TBC4 463 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 MICAL1Q8TDZ2 1067 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SECISBP2LQ93073 1101 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 MYRFLQ96LU7 910 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 KCNK16Q96T55 309 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 MED10Q9BTT4 135 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 MIS12Q9H081 205 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 TLE6Q9H808 572 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 KCND1Q9NSA2 647 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ANGPTL2Q9UKU9 493 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ASB3Q9Y575 518 aa11.73□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CEP295Q9C0D2 2601 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 TCRBV5S1A1TA0A578 114 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ANKRD62A6NC57 917 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 M0QYV0 167 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PJA2O43164 708 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CSPG5O95196 566 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 GLUD1P00367 558 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 FTLP02792 175 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PTMAP06454 111 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SP9P0CG40 484 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 MYBL1P10243 752 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 HOXB8P17481 243 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 TGM1P22735 817 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ADORA2BP29275 332 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 KRT83P78385 493 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 GFPT1Q06210 699 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PDCLQ13371 301 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PPM1JQ5JR12 505 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CCDC122Q5T0U0 273 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 MON1BQ7L1V2 547 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 BEND5Q7L4P6 421 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PIGZQ86VD9 579 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 MCOLN2Q8IZK6 566 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ZNF276Q8N554 614 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 C1orf131Q8NDD1 294 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CPA5Q8WXQ8 436 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PPP1R13BQ96KQ4 1090 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 NOX5Q96PH1 765 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CPXM1Q96SM3 734 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.72□□□□□ -0.531e-6■□□□□ 8
CDK5RAP3-204ENST00000577664 TTLL2Q9BWV7 592 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PDCL3Q9H2J4 239 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 DEF6Q9H4E7 631 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CNGB3Q9NQW8 809 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 KRT82Q9NSB4 513 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ABI2Q9NYB9 513 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 TAS2R14Q9NYV8 317 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 EHD2Q9NZN4 543 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 WDR35Q9P2L0 1181 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 REXO2Q9Y3B8 237 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ADGRG1Q9Y653 693 aa11.72□□□□□ -0.53
CDK5RAP3-204ENST00000577664 BTNL10A8MVZ5 291 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 F8VP50 259 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 TULP2O00295 520 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ZMYND10O75800 440 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CALB1P05937 261 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PROS1P07225 676 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ASGR2P07307 311 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 GLI1P08151 1106 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 HNRNPA1P09651 372 aaKnown RBP eCLIP11.71□□□□□ -0.538e-6■□□□□ 10.1
CDK5RAP3-204ENST00000577664 SP100P23497 879 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ELF1P32519 619 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 GRIK1P39086 918 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 NSFP46459 744 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ARPP19P56211 112 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 MAP3K7CLP57077 242 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PLD1Q13393 1074 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 MTF1Q14872 753 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PTPN20Q4JDL3 420 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SNX30Q5VWJ9 437 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 NAA35Q5VZE5 725 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ERICH1Q86X53 443 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 NUP93Q8N1F7 819 aa11.71□□□□□ -0.53
CDK5RAP3-204ENST00000577664 TTC9BQ8N6N2 239 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms