RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 CLSTN1O94985 981 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 OAZ2O95190 189 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 BPNT1O95861 308 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 PIGRP01833 764 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 FURINP09958 794 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 MAP4P27816 1152 aaKnown RBP6.73□□□□□ -1.33
NUP88-212ENST00000576708 GDI1P31150 447 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 HOXC13P31276 330 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 ID4P47928 161 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 SOX9P48436 509 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 AARSP49588 968 aaKnown RBP eCLIP6.73□□□□□ -1.33
NUP88-212ENST00000576708 ZNF131P52739 623 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 LILRA4P59901 499 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 PFKPQ01813 784 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 CYP4A22Q5TCH4 519 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 SPATA1Q5VX52 437 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 C9orf57Q5W0N0 161 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 IQCEQ6IPM2 695 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 CENPPQ6IPU0 288 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 PRR23CQ6ZRP0 262 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 RTL10Q7L3V2 364 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 UBE3DQ7Z6J8 389 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 USP37Q86T82 979 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 TMC8Q8IU68 726 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 ELMOD1Q8N336 334 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 SUMF1Q8NBK3 374 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 ZSWIM2Q8NEG5 633 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 BEST2Q8NFU1 509 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 OR10T2Q8NGX3 314 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 RASSF8Q8NHQ8 419 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 TTC8Q8TAM2 541 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 ZSCAN18Q8TBC5 510 aaPredicted RBP6.73□□□□□ -1.33
NUP88-212ENST00000576708 SMARCD2Q92925 531 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 SENP8Q96LD8 212 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 AK8Q96MA6 479 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 CLIC6Q96NY7 704 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 TRMT61BQ9BVS5 477 aaKnown RBP6.73□□□□□ -1.33
NUP88-212ENST00000576708 ACBD3Q9H3P7 528 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 GSX1Q9H4S2 264 aaPredicted RBP6.73□□□□□ -1.33
NUP88-212ENST00000576708 BRD9Q9H8M2 597 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 PLEKHA5Q9HAU0 1116 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 PARVGQ9HBI0 331 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 ZFP14Q9HCL3 533 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 SSU72Q9NP77 194 aaKnown RBP6.73□□□□□ -1.33
NUP88-212ENST00000576708 ASAH2Q9NR71 780 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 IGSF5Q9NSI5 407 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 KCND2Q9NZV8 630 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 TBC1D7Q9P0N9 293 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 KCNG1Q9UIX4 513 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 CPSF3Q9UKF6 684 aaKnown RBP6.73□□□□□ -1.33
NUP88-212ENST00000576708 ODF2LQ9ULJ1 636 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.73□□□□□ -1.33
NUP88-212ENST00000576708 CITO14578 2027 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 MYH11P35749 1972 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 HMX2A2RU54 273 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 MTMR11A4FU01 709 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 OR6C75A6NL08 312 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 HEPACAM2A8MVW5 462 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 H0YCG3 227 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 GFRA2O00451 464 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 PIRO00625 290 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 GREM1O60565 184 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 ADAM23O75077 832 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 CILPO75339 1184 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 TBCAO75347 108 aaKnown RBP6.72□□□□□ -1.33
NUP88-212ENST00000576708 CENPBP07199 599 aaPredicted RBP6.72□□□□□ -1.33
NUP88-212ENST00000576708 ADRB2P07550 413 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 CYP3A5P20815 502 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 CCNE1P24864 410 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 DDIT3P35638 169 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 LONP1P36776 959 aaKnown RBP6.72□□□□□ -1.33
NUP88-212ENST00000576708 EPHA5P54756 1037 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 GTF2BQ00403 316 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 CEBPZQ03701 1054 aaKnown RBP6.72□□□□□ -1.33
NUP88-212ENST00000576708 MTAPQ13126 283 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 GPR17Q13304 367 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 TMEM132DQ14C87 1099 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 PTPAQ15257 358 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 NFKBIBQ15653 356 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 RSPO4Q2I0M5 234 aaPredicted RBP6.72□□□□□ -1.33
NUP88-212ENST00000576708 ADALQ6DHV7 355 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 OVOS1Q6IE37 1185 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 CRELD2Q6UXH1 353 aaPredicted RBP6.72□□□□□ -1.33
NUP88-212ENST00000576708 ZNF852Q6ZMS4 543 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 DNAJB7Q7Z6W7 309 aaPredicted RBP6.72□□□□□ -1.33
NUP88-212ENST00000576708 SFR1Q86XK3 245 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 EFCAB13Q8IY85 973 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 RNF214Q8ND24 703 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 STKLD1Q8NE28 680 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 LARP4BQ92615 738 aaKnown RBP6.72□□□□□ -1.33
NUP88-212ENST00000576708 CLDN23Q96B33 292 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 RMDN1Q96DB5 314 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 EAF1Q96JC9 268 aaPredicted RBP6.72□□□□□ -1.33
NUP88-212ENST00000576708 ZFYVE19Q96K21 471 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 LRRC3BQ96PB8 259 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 FGFBP2Q9BYJ0 223 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 PANK2Q9BZ23 570 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 OSBPL6Q9BZF3 934 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 SEMA6CQ9H3T2 930 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 SLITRK6Q9H5Y7 841 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms