RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 BRD2P25440 801 aaKnown RBP16.06■□□□□ 0.16
SMG6-220ENST00000576218 RPS9P46781 194 aaKnown RBP16.06■□□□□ 0.16
SMG6-220ENST00000576218 TKTL1P51854 596 aa16.06■□□□□ 0.16
SMG6-220ENST00000576218 KIF11P52732 1056 aa16.06■□□□□ 0.16
SMG6-220ENST00000576218 PDE4CQ08493 712 aa16.06■□□□□ 0.16
SMG6-220ENST00000576218 GRSF1Q12849 480 aaKnown RBP eCLIP16.06■□□□□ 0.16
SMG6-220ENST00000576218 PPP2R5DQ14738 602 aa16.06■□□□□ 0.16
SMG6-220ENST00000576218 ARHGAP44Q17R89 818 aa16.06■□□□□ 0.16
SMG6-220ENST00000576218 SNX30Q5VWJ9 437 aa16.06■□□□□ 0.16
SMG6-220ENST00000576218 TTC30AQ86WT1 665 aa16.06■□□□□ 0.16
SMG6-220ENST00000576218 UBR7Q8N806 425 aa16.06■□□□□ 0.16
SMG6-220ENST00000576218 RIN3Q8TB24 985 aa16.06■□□□□ 0.16
SMG6-220ENST00000576218 MED15Q96RN5 788 aa16.06■□□□□ 0.16
SMG6-220ENST00000576218 ECT2Q9H8V3 914 aa16.06■□□□□ 0.16
SMG6-220ENST00000576218 TBC1D14Q9P2M4 693 aa16.06■□□□□ 0.16
SMG6-220ENST00000576218 LSM7Q9UK45 103 aaKnown RBP16.06■□□□□ 0.16
SMG6-220ENST00000576218 ANAPC1Q9H1A4 1944 aa16.06■□□□□ 0.16
SMG6-220ENST00000576218 GTPBP10A4D1E9 387 aaKnown RBP16.05■□□□□ 0.16
SMG6-220ENST00000576218 O00370 1275 aa16.05■□□□□ 0.16
SMG6-220ENST00000576218 MED7O43513 233 aa16.05■□□□□ 0.16
SMG6-220ENST00000576218 ZDHHC11BP0C7U3 371 aa16.05■□□□□ 0.16
SMG6-220ENST00000576218 SLC9A1P19634 815 aa16.05■□□□□ 0.16
SMG6-220ENST00000576218 EML3Q32P44 896 aa16.05■□□□□ 0.16
SMG6-220ENST00000576218 VWA3BQ502W6 1294 aa16.05■□□□□ 0.16
SMG6-220ENST00000576218 DGKKQ5KSL6 1271 aa16.05■□□□□ 0.16
SMG6-220ENST00000576218 TXNDC11Q6PKC3 985 aa16.05■□□□□ 0.16
SMG6-220ENST00000576218 CCDC186Q7Z3E2 898 aa16.05■□□□□ 0.16
SMG6-220ENST00000576218 IRF2BP1Q8IU81 584 aa16.05■□□□□ 0.16
SMG6-220ENST00000576218 GOLGA1Q92805 767 aa16.05■□□□□ 0.16
SMG6-220ENST00000576218 UBXN6Q9BZV1 441 aa16.05■□□□□ 0.16
SMG6-220ENST00000576218 NDST4Q9H3R1 872 aa16.05■□□□□ 0.16
SMG6-220ENST00000576218 DLGAP2Q9P1A6 1054 aa16.05■□□□□ 0.16
SMG6-220ENST00000576218 APEX2Q9UBZ4 518 aa16.05■□□□□ 0.16
SMG6-220ENST00000576218 RASAL2Q9UJF2 1139 aa16.05■□□□□ 0.16
SMG6-220ENST00000576218 DNMT3LQ9UJW3 386 aa16.05■□□□□ 0.16
SMG6-220ENST00000576218 HELZP42694 1942 aaKnown RBP16.05■□□□□ 0.16
SMG6-220ENST00000576218 PATJQ8NI35 1801 aa16.04■□□□□ 0.16
SMG6-220ENST00000576218 THAP12O43422 761 aa16.04■□□□□ 0.16
SMG6-220ENST00000576218 ZBED1O96006 694 aa16.04■□□□□ 0.16
SMG6-220ENST00000576218 ADH1CP00326 375 aa16.04■□□□□ 0.16
SMG6-220ENST00000576218 LCP1P13796 627 aa16.04■□□□□ 0.16
SMG6-220ENST00000576218 EEF1GP26641 437 aaKnown RBP16.04■□□□□ 0.16
SMG6-220ENST00000576218 RGS7P49802 495 aa16.04■□□□□ 0.16
SMG6-220ENST00000576218 CSTF1Q05048 431 aaKnown RBP16.04■□□□□ 0.16
SMG6-220ENST00000576218 ADIGQ0VDE8 80 aa16.04■□□□□ 0.16
SMG6-220ENST00000576218 BTBD8Q5XKL5 378 aa16.04■□□□□ 0.16
SMG6-220ENST00000576218 GJB7Q6PEY0 223 aa16.04■□□□□ 0.16
SMG6-220ENST00000576218 ZC3H14Q6PJT7 736 aaKnown RBP16.04■□□□□ 0.16
SMG6-220ENST00000576218 LCLAT1Q6UWP7 414 aa16.04■□□□□ 0.16
SMG6-220ENST00000576218 MIB1Q86YT6 1006 aa16.04■□□□□ 0.16
SMG6-220ENST00000576218 ENOX1Q8TC92 643 aaKnown RBP16.04■□□□□ 0.16
SMG6-220ENST00000576218 SECISBP2LQ93073 1101 aaKnown RBP16.04■□□□□ 0.16
SMG6-220ENST00000576218 CLDN23Q96B33 292 aa16.04■□□□□ 0.16
SMG6-220ENST00000576218 KREMEN1Q96MU8 473 aa16.04■□□□□ 0.16
SMG6-220ENST00000576218 P2RY13Q9BPV8 354 aa16.04■□□□□ 0.16
SMG6-220ENST00000576218 IER2Q9BTL4 223 aa16.04■□□□□ 0.16
SMG6-220ENST00000576218 LINC00597Q9H2U6 94 aa16.04■□□□□ 0.16
SMG6-220ENST00000576218 CYLDQ9NQC7 956 aa16.04■□□□□ 0.16
SMG6-220ENST00000576218 SAMSN1Q9NSI8 373 aaKnown RBP16.04■□□□□ 0.16
SMG6-220ENST00000576218 RBM12Q9NTZ6 932 aaKnown RBP16.04■□□□□ 0.16
SMG6-220ENST00000576218 NUDT5Q9UKK9 219 aa16.04■□□□□ 0.16
SMG6-220ENST00000576218 STRIP2Q9ULQ0 834 aa16.04■□□□□ 0.16
SMG6-220ENST00000576218 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.04■□□□□ 0.16
SMG6-220ENST00000576218 F5P12259 2224 aa16.04■□□□□ 0.16
SMG6-220ENST00000576218 COL4A2P08572 1712 aa16.04■□□□□ 0.16
SMG6-220ENST00000576218 E2F8A0AVK6 867 aa16.03■□□□□ 0.16
SMG6-220ENST00000576218 LETM1O95202 739 aaPredicted RBP16.03■□□□□ 0.16
SMG6-220ENST00000576218 TBX18O95935 607 aa16.03■□□□□ 0.16
SMG6-220ENST00000576218 GNA15P30679 374 aa16.03■□□□□ 0.16
SMG6-220ENST00000576218 GJA4P35212 333 aa16.03■□□□□ 0.16
SMG6-220ENST00000576218 PLA2G4AP47712 749 aa16.03■□□□□ 0.16
SMG6-220ENST00000576218 YWHAGP61981 247 aaKnown RBP eCLIP16.03■□□□□ 0.16
SMG6-220ENST00000576218 EFEMP1Q12805 493 aa16.03■□□□□ 0.16
SMG6-220ENST00000576218 MTAPQ13126 283 aa16.03■□□□□ 0.16
SMG6-220ENST00000576218 CNGA2Q16280 664 aa16.03■□□□□ 0.16
SMG6-220ENST00000576218 TCP11X2Q5H9J9 407 aa16.03■□□□□ 0.16
SMG6-220ENST00000576218 FKBP15Q5T1M5 1219 aa16.03■□□□□ 0.16
SMG6-220ENST00000576218 CAVIN1Q6NZI2 390 aaKnown RBP16.03■□□□□ 0.16
SMG6-220ENST00000576218 RBM43Q6ZSC3 357 aaKnown RBP16.03■□□□□ 0.16
SMG6-220ENST00000576218 RNF139Q8WU17 664 aa16.03■□□□□ 0.16
SMG6-220ENST00000576218 TFAP2BQ92481 460 aa16.03■□□□□ 0.16
SMG6-220ENST00000576218 ULBP1Q9BZM6 244 aa16.03■□□□□ 0.16
SMG6-220ENST00000576218 NAT10Q9H0A0 1025 aaKnown RBP16.03■□□□□ 0.16
SMG6-220ENST00000576218 CHRDQ9H2X0 955 aa16.03■□□□□ 0.16
SMG6-220ENST00000576218 NMUR1Q9HB89 426 aa16.03■□□□□ 0.16
SMG6-220ENST00000576218 ST7Q9NRC1 585 aa16.03■□□□□ 0.16
SMG6-220ENST00000576218 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.03■□□□□ 0.16
SMG6-220ENST00000576218 TAB2Q9NYJ8 693 aa16.03■□□□□ 0.16
SMG6-220ENST00000576218 OTOL1A6NHN0 477 aaPredicted RBP16.02■□□□□ 0.16
SMG6-220ENST00000576218 RNF225M0QZC1 329 aaPredicted RBP16.02■□□□□ 0.16
SMG6-220ENST00000576218 TULP2O00295 520 aa16.02■□□□□ 0.16
SMG6-220ENST00000576218 MDM4O15151 490 aa16.02■□□□□ 0.16
SMG6-220ENST00000576218 CALCAP01258 141 aa16.02■□□□□ 0.16
SMG6-220ENST00000576218 CHRNB1P11230 501 aa16.02■□□□□ 0.16
SMG6-220ENST00000576218 CDK11BP21127 795 aaKnown RBP16.02■□□□□ 0.16
SMG6-220ENST00000576218 PON1P27169 355 aa16.02■□□□□ 0.16
SMG6-220ENST00000576218 PGFP49763 221 aa16.02■□□□□ 0.16
SMG6-220ENST00000576218 CCR3P51677 355 aa16.02■□□□□ 0.16
SMG6-220ENST00000576218 ZXDBP98169 803 aa16.02■□□□□ 0.16
SMG6-220ENST00000576218 MYL5Q02045 173 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms