RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 ZNF263O14978 683 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 XPO1O14980 1071 aaKnown RBP9.15□□□□□ -0.94
SMG6-216ENST00000575176 MDM4O15151 490 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 TLR5O60602 858 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 TBX18O95935 607 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 MBD3O95983 291 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 CYP17A1P05093 508 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 CKMP06732 381 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 OPRD1P41143 372 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 RPS9P46781 194 aaKnown RBP9.15□□□□□ -0.94
SMG6-216ENST00000575176 PPP3CCP48454 512 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 BCAT1P54687 386 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 IFRD2Q12894 506 aaPredicted RBP9.15□□□□□ -0.94
SMG6-216ENST00000575176 KRT31Q15323 416 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 MEA1Q16626 185 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 TCP11X2Q5H9J9 407 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 FSTL4Q6MZW2 842 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 PMF1Q6P1K2 205 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 KLHDC10Q6PID8 442 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 TMEM270Q6UE05 265 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 Q6ZNB5 142 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 Q6ZS52 159 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 C12orf40Q86WS4 652 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 SFTPA1Q8IWL2 248 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 SCML4Q8N228 414 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 DTWD2Q8NBA8 298 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 PDZD8Q8NEN9 1154 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 NDRG1Q92597 394 aaKnown RBP9.15□□□□□ -0.94
SMG6-216ENST00000575176 JAKMIP2Q96AA8 810 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 PIWIL1Q96J94 861 aaKnown RBP9.15□□□□□ -0.94
SMG6-216ENST00000575176 SLITRK1Q96PX8 696 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 KLF16Q9BXK1 252 aaPredicted RBP9.15□□□□□ -0.94
SMG6-216ENST00000575176 UBXN6Q9BZV1 441 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 LINC00597Q9H2U6 94 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 CHRDQ9H2X0 955 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 NDST4Q9H3R1 872 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 EBF3Q9H4W6 596 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 TJP2Q9UDY2 1190 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 SIK3Q9Y2K2 1263 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 HCN4Q9Y3Q4 1203 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 FAM186AA6NE01 2351 aa9.15□□□□□ -0.95
SMG6-216ENST00000575176 DOCK4Q8N1I0 1966 aa9.15□□□□□ -0.95
SMG6-216ENST00000575176 CHD5Q8TDI0 1954 aa9.15□□□□□ -0.95
SMG6-216ENST00000575176 KCNJ18B7U540 433 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 FYNP06241 537 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 VDRP11473 427 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 HDCP19113 662 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 EEF1GP26641 437 aaKnown RBP9.14□□□□□ -0.95
SMG6-216ENST00000575176 GJA4P35212 333 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 GPD2P43304 727 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 KLK7P49862 253 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 PLCB2Q00722 1185 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 TYRO3Q06418 890 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 BST2Q10589 180 aaKnown RBP9.14□□□□□ -0.95
SMG6-216ENST00000575176 RUNX3Q13761 415 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 KCNJ12Q14500 433 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 TAF12Q16514 161 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 VWA3BQ502W6 1294 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 SGO2Q562F6 1265 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 TMEM196Q5HYL7 178 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 DHX40Q8IX18 779 aaKnown RBP9.14□□□□□ -0.95
SMG6-216ENST00000575176 ETFBKMTQ8IXQ9 262 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 WDTC1Q8N5D0 677 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 CCDC150Q8NCX0 1101 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 TTC8Q8TAM2 541 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 CLEC4CQ8WTT0 213 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 KCTD13Q8WZ19 329 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 SECISBP2LQ93073 1101 aaKnown RBP9.14□□□□□ -0.95
SMG6-216ENST00000575176 MSANTD3Q96H12 275 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 HEXIM2Q96MH2 286 aaKnown RBP9.14□□□□□ -0.95
SMG6-216ENST00000575176 TUBGCP2Q9BSJ2 902 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 ULBP1Q9BZM6 244 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 ECT2Q9H8V3 914 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 GKN1Q9NS71 199 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 RBM12Q9NTZ6 932 aaKnown RBP9.14□□□□□ -0.95
SMG6-216ENST00000575176 SMPD4Q9NXE4 827 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 TAB2Q9NYJ8 693 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 CLIC5Q9NZA1 410 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 CHORDC1Q9UHD1 332 aaPredicted RBP9.14□□□□□ -0.95
SMG6-216ENST00000575176 HCN2Q9UL51 889 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 SIT1Q9Y3P8 196 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 FHOD1Q9Y613 1164 aa9.14□□□□□ -0.95
SMG6-216ENST00000575176 CACNA1AO00555 2505 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 YJEFN3A6XGL0 299 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 E7ENQ6 273 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 PROB1E7EW31 1015 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 TRDMT1O14717 391 aaKnown RBP9.13□□□□□ -0.95
SMG6-216ENST00000575176 CLSTN1O94985 981 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 KLKB1P03952 638 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 SETSIPP0DME0 302 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 ATP1A3P13637 1013 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 CLCN1P35523 988 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 NBL1P41271 181 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 JAM2P57087 298 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 DAOAP59103 153 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 ADIGQ0VDE8 80 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 MTAPQ13126 283 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 EIF4EBP2Q13542 120 aaPredicted RBP9.13□□□□□ -0.95
SMG6-216ENST00000575176 IQCB1Q15051 598 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 PDGFRLQ15198 375 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms