RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 PTPN20Q4JDL3 420 aa15.24■□□□□ 0.03
NPLOC4-218ENST00000574964 HECTD3Q5T447 861 aa15.24■□□□□ 0.03
NPLOC4-218ENST00000574964 HGSNATQ68CP4 663 aa15.24■□□□□ 0.03
NPLOC4-218ENST00000574964 TXNDC8Q6A555 127 aa15.24■□□□□ 0.03
NPLOC4-218ENST00000574964 PM20D1Q6GTS8 502 aa15.24■□□□□ 0.03
NPLOC4-218ENST00000574964 TMEM150AQ86TG1 271 aa15.24■□□□□ 0.03
NPLOC4-218ENST00000574964 NPAS3Q8IXF0 933 aa15.24■□□□□ 0.03
NPLOC4-218ENST00000574964 PLCD3Q8N3E9 789 aa15.24■□□□□ 0.03
NPLOC4-218ENST00000574964 SLC30A5Q8TAD4 765 aa15.24■□□□□ 0.03
NPLOC4-218ENST00000574964 IRGQQ8WZA9 623 aa15.24■□□□□ 0.03
NPLOC4-218ENST00000574964 NDRG1Q92597 394 aaKnown RBP15.24■□□□□ 0.03
NPLOC4-218ENST00000574964 FAM149B1Q96BN6 582 aa15.24■□□□□ 0.03
NPLOC4-218ENST00000574964 MYADMQ96S97 322 aa15.24■□□□□ 0.03
NPLOC4-218ENST00000574964 C11orf70Q9BRQ4 267 aa15.24■□□□□ 0.03
NPLOC4-218ENST00000574964 GDE1Q9NZC3 331 aa15.24■□□□□ 0.03
NPLOC4-218ENST00000574964 TRAV19A0A0A6YYK7 116 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 SOBPA7XYQ1 873 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 AKR1B10O60218 316 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 TADA3O75528 432 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 ERBB2P04626 1255 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 CKMP06732 381 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 PLEKP08567 350 aaPredicted RBP15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 UNGP13051 313 aaPredicted RBP15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 HDCP19113 662 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 AVPR1AP37288 418 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 EIF4A3P38919 411 aaKnown RBP15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 RPL34P49207 117 aaKnown RBP15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 CENPCQ03188 943 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 ARID5BQ14865 1188 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 STXBP5Q5T5C0 1151 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 ACAD10Q6JQN1 1059 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 MMS22LQ6ZRQ5 1243 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 TOGARAM2Q6ZUX3 1019 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 RSRC2Q7L4I2 434 aaKnown RBP15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 TADA2BQ86TJ2 420 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 SCML4Q8N228 414 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 TC2NQ8N9U0 490 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 RNF139Q8WU17 664 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 CCDC42Q96M95 316 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 SLC46A2Q9BY10 475 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 ADAM22Q9P0K1 906 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 ARHGAP20Q9P2F6 1191 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 TJP2Q9UDY2 1190 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 PRKAG3Q9UGI9 489 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 ADAMTS1Q9UHI8 967 aa15.23■□□□□ 0.03
NPLOC4-218ENST00000574964 C2orf78A6NCI8 922 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 YJEFN3A6XGL0 299 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 E7ENQ6 273 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 GOLGA8SH3BPF8 625 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 DDX3XO00571 662 aaKnown RBP eCLIP15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 DPYSL4O14531 572 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 CAPN9O14815 690 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 PAPSS1O43252 624 aaPredicted RBP15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 TLR5O60602 858 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 GABBR2O75899 941 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 LTFP02788 710 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 CALB1P05937 261 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 ZDHHC11BP0C7U3 371 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 MBL2P11226 248 aaPredicted RBP15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 LAMP2P13473 410 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 RARGP13631 454 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 PFKLP17858 780 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 EFHC1Q5JVL4 640 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 BSPRYQ5W0U4 402 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 WDR59Q6PJI9 974 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 FAM183BPQ6ZVS7 135 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 SCD5Q86SK9 330 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 PHF13Q86YI8 300 aaPredicted RBP15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 ZDHHC17Q8IUH5 632 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 ARL14EPQ8N8R7 260 aaPredicted RBP15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 ZSCAN18Q8TBC5 510 aaPredicted RBP15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 CLEC4CQ8WTT0 213 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 CDK5RAP1Q96SZ6 601 aaKnown RBP15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 SYT11Q9BT88 431 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 TRIM62Q9BVG3 475 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 NMUR1Q9HB89 426 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 ABCC13Q9NSE7 274 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 CLIC5Q9NZA1 410 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 STRIP2Q9ULQ0 834 aa15.22■□□□□ 0.03
NPLOC4-218ENST00000574964 SSU72P8A0A1W2PR75 194 aa15.21■□□□□ 0.03
NPLOC4-218ENST00000574964 C2CD4DB7Z1M9 353 aa15.21■□□□□ 0.03
NPLOC4-218ENST00000574964 NRG2O14511 850 aaPredicted RBP15.21■□□□□ 0.03
NPLOC4-218ENST00000574964 RTN2O75298 545 aa15.21■□□□□ 0.03
NPLOC4-218ENST00000574964 GZMAP12544 262 aa15.21■□□□□ 0.03
NPLOC4-218ENST00000574964 BMP1P13497 986 aa15.21■□□□□ 0.03
NPLOC4-218ENST00000574964 MMP8P22894 467 aa15.21■□□□□ 0.03
NPLOC4-218ENST00000574964 ATP5C1P36542 298 aaKnown RBP15.21■□□□□ 0.03
NPLOC4-218ENST00000574964 TUBP50607 506 aa15.21■□□□□ 0.03
NPLOC4-218ENST00000574964 GSDMDP57764 484 aa15.21■□□□□ 0.03
NPLOC4-218ENST00000574964 SLC6A3Q01959 620 aa15.21■□□□□ 0.03
NPLOC4-218ENST00000574964 C2CD6Q53TS8 623 aa15.21■□□□□ 0.03
NPLOC4-218ENST00000574964 C10orf120Q5SQS8 335 aa15.21■□□□□ 0.03
NPLOC4-218ENST00000574964 FAM102AQ5T9C2 384 aaPredicted RBP15.21■□□□□ 0.03
NPLOC4-218ENST00000574964 SNX30Q5VWJ9 437 aa15.21■□□□□ 0.03
NPLOC4-218ENST00000574964 MTSS1LQ765P7 747 aa15.21■□□□□ 0.03
NPLOC4-218ENST00000574964 ARID3BQ8IVW6 561 aaPredicted RBP15.21■□□□□ 0.03
NPLOC4-218ENST00000574964 ADHFE1Q8IWW8 467 aa15.21■□□□□ 0.03
NPLOC4-218ENST00000574964 CMTM8Q8IZV2 173 aa15.21■□□□□ 0.03
NPLOC4-218ENST00000574964 TTC16Q8NEE8 873 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms