RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 FBXO43Q4G163 708 aa27.5■■□□□ 1.99
NPLOC4-215ENST00000574095 TTC39CQ8N584 583 aa27.5■■□□□ 1.99
NPLOC4-215ENST00000574095 WBP2Q969T9 261 aa27.5■■□□□ 1.99
NPLOC4-215ENST00000574095 DUSP16Q9BY84 665 aa27.5■■□□□ 1.99
NPLOC4-215ENST00000574095 SCML2Q9UQR0 700 aa27.5■■□□□ 1.99
NPLOC4-215ENST00000574095 SH3BP1Q9Y3L3 701 aa27.5■■□□□ 1.99
NPLOC4-215ENST00000574095 E2F8A0AVK6 867 aa27.49■■□□□ 1.99
NPLOC4-215ENST00000574095 CYP26A1O43174 497 aa27.49■■□□□ 1.99
NPLOC4-215ENST00000574095 TLR5O60602 858 aa27.49■■□□□ 1.99
NPLOC4-215ENST00000574095 TBX18O95935 607 aa27.49■■□□□ 1.99
NPLOC4-215ENST00000574095 IRF1P10914 325 aa27.49■■□□□ 1.99
NPLOC4-215ENST00000574095 PPP1R2P41236 205 aa27.49■■□□□ 1.99
NPLOC4-215ENST00000574095 MORC3Q14149 939 aa27.49■■□□□ 1.99
NPLOC4-215ENST00000574095 RHBDF2Q6PJF5 856 aa27.49■■□□□ 1.99
NPLOC4-215ENST00000574095 PRR23BQ6ZRT6 265 aa27.49■■□□□ 1.99
NPLOC4-215ENST00000574095 RPLP0P6Q8NHW5 317 aa27.49■■□□□ 1.99
NPLOC4-215ENST00000574095 NELFBQ8WX92 580 aa27.49■■□□□ 1.99
NPLOC4-215ENST00000574095 METTL14Q9HCE5 456 aaKnown RBP27.49■■□□□ 1.99
NPLOC4-215ENST00000574095 PNPLA8Q9NP80 782 aa27.49■■□□□ 1.99
NPLOC4-215ENST00000574095 OSER1Q9NX31 292 aa27.49■■□□□ 1.99
NPLOC4-215ENST00000574095 TBC1D14Q9P2M4 693 aa27.49■■□□□ 1.99
NPLOC4-215ENST00000574095 SLC8A2Q9UPR5 921 aa27.49■■□□□ 1.99
NPLOC4-215ENST00000574095 GPR179Q6PRD1 2367 aa27.48■■□□□ 1.99
NPLOC4-215ENST00000574095 PXNP49023 591 aaPredicted RBP27.48■■□□□ 1.99
NPLOC4-215ENST00000574095 LRMPQ12912 555 aa27.48■■□□□ 1.99
NPLOC4-215ENST00000574095 CCDC40Q4G0X9 1142 aa27.48■■□□□ 1.99
NPLOC4-215ENST00000574095 TTI2Q6NXR4 508 aa27.48■■□□□ 1.99
NPLOC4-215ENST00000574095 CEP63Q96MT8 703 aa27.48■■□□□ 1.99
NPLOC4-215ENST00000574095 NMUR1Q9HB89 426 aa27.48■■□□□ 1.99
NPLOC4-215ENST00000574095 CTNND2Q9UQB3 1225 aa27.48■■□□□ 1.99
NPLOC4-215ENST00000574095 KIAA1549LQ6ZVL6 1849 aa27.48■■□□□ 1.99
NPLOC4-215ENST00000574095 HOXA6P31267 233 aa27.47■■□□□ 1.99
NPLOC4-215ENST00000574095 SLC6A11P48066 632 aa27.47■■□□□ 1.99
NPLOC4-215ENST00000574095 KIF11P52732 1056 aa27.47■■□□□ 1.99
NPLOC4-215ENST00000574095 CUL2Q13617 745 aa27.47■■□□□ 1.99
NPLOC4-215ENST00000574095 SIM2Q14190 667 aaPredicted RBP27.47■■□□□ 1.99
NPLOC4-215ENST00000574095 RAB23Q9ULC3 237 aa27.47■■□□□ 1.99
NPLOC4-215ENST00000574095 A0A1W2PQH9 124 aa27.46■■□□□ 1.99
NPLOC4-215ENST00000574095 ANTXRLA6NF34 631 aa27.46■■□□□ 1.99
NPLOC4-215ENST00000574095 FMO5P49326 533 aa27.46■■□□□ 1.99
NPLOC4-215ENST00000574095 STX17P56962 302 aa27.46■■□□□ 1.99
NPLOC4-215ENST00000574095 WDR5BQ86VZ2 330 aa27.46■■□□□ 1.99
NPLOC4-215ENST00000574095 BBS7Q8IWZ6 715 aa27.46■■□□□ 1.99
NPLOC4-215ENST00000574095 SECISBP2LQ93073 1101 aaKnown RBP27.46■■□□□ 1.99
NPLOC4-215ENST00000574095 CYLDQ9NQC7 956 aa27.46■■□□□ 1.99
NPLOC4-215ENST00000574095 NUDT5Q9UKK9 219 aa27.46■■□□□ 1.99
NPLOC4-215ENST00000574095 K7EQS6 105 aa27.45■■□□□ 1.98
NPLOC4-215ENST00000574095 RARGP13631 454 aa27.45■■□□□ 1.98
NPLOC4-215ENST00000574095 CNR2P34972 360 aa27.45■■□□□ 1.98
NPLOC4-215ENST00000574095 ATP5C1P36542 298 aaKnown RBP27.45■■□□□ 1.98
NPLOC4-215ENST00000574095 SEC13P55735 322 aa27.45■■□□□ 1.98
NPLOC4-215ENST00000574095 LY6G5CQ5SRR4 150 aa27.45■■□□□ 1.98
NPLOC4-215ENST00000574095 ARHGAP17Q68EM7 881 aa27.45■■□□□ 1.98
NPLOC4-215ENST00000574095 C12orf40Q86WS4 652 aa27.45■■□□□ 1.98
NPLOC4-215ENST00000574095 KLF16Q9BXK1 252 aaPredicted RBP27.45■■□□□ 1.98
NPLOC4-215ENST00000574095 FAM124BQ9H5Z6 455 aaPredicted RBP27.45■■□□□ 1.98
NPLOC4-215ENST00000574095 BICDL2A1A5D9 508 aa27.44■■□□□ 1.98
NPLOC4-215ENST00000574095 MDM4O15151 490 aa27.44■■□□□ 1.98
NPLOC4-215ENST00000574095 ADH1CP00326 375 aa27.44■■□□□ 1.98
NPLOC4-215ENST00000574095 ADH5P11766 374 aa27.44■■□□□ 1.98
NPLOC4-215ENST00000574095 OTUB2Q96DC9 234 aa27.44■■□□□ 1.98
NPLOC4-215ENST00000574095 HHIPQ96QV1 700 aa27.44■■□□□ 1.98
NPLOC4-215ENST00000574095 PNKPQ96T60 521 aa27.44■■□□□ 1.98
NPLOC4-215ENST00000574095 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.44■■□□□ 1.98
NPLOC4-215ENST00000574095 NAGPAQ9UK23 515 aa27.44■■□□□ 1.98
NPLOC4-215ENST00000574095 GMEB2Q9UKD1 530 aa27.44■■□□□ 1.98
NPLOC4-215ENST00000574095 USP3Q9Y6I4 520 aa27.44■■□□□ 1.98
NPLOC4-215ENST00000574095 SPTBN4Q9H254 2564 aa27.44■■□□□ 1.98
NPLOC4-215ENST00000574095 MESP2Q0VG99 397 aa27.43■■□□□ 1.98
NPLOC4-215ENST00000574095 C2orf27AQ580R0 203 aa27.43■■□□□ 1.98
NPLOC4-215ENST00000574095 SYT13Q7L8C5 426 aa27.43■■□□□ 1.98
NPLOC4-215ENST00000574095 CCDC186Q7Z3E2 898 aa27.43■■□□□ 1.98
NPLOC4-215ENST00000574095 SCD5Q86SK9 330 aa27.43■■□□□ 1.98
NPLOC4-215ENST00000574095 SFTPA1Q8IWL2 248 aa27.43■■□□□ 1.98
NPLOC4-215ENST00000574095 ANKRD52Q8NB46 1076 aa27.43■■□□□ 1.98
NPLOC4-215ENST00000574095 CHMP5Q9NZZ3 219 aa27.43■■□□□ 1.98
NPLOC4-215ENST00000574095 ID4P47928 161 aa27.42■■□□□ 1.98
NPLOC4-215ENST00000574095 UBE2HP62256 183 aa27.42■■□□□ 1.98
NPLOC4-215ENST00000574095 YWHAEP62258 255 aaKnown RBP27.42■■□□□ 1.98
NPLOC4-215ENST00000574095 GAD2Q05329 585 aa27.42■■□□□ 1.98
NPLOC4-215ENST00000574095 PAK1Q13153 545 aa27.42■■□□□ 1.98
NPLOC4-215ENST00000574095 DMC1Q14565 340 aa27.42■■□□□ 1.98
NPLOC4-215ENST00000574095 CAMK4Q16566 473 aa27.42■■□□□ 1.98
NPLOC4-215ENST00000574095 LAIR1Q6GTX8 287 aa27.42■■□□□ 1.98
NPLOC4-215ENST00000574095 FOXR2Q6PJQ5 311 aa27.42■■□□□ 1.98
NPLOC4-215ENST00000574095 CEP68Q76N32 757 aa27.42■■□□□ 1.98
NPLOC4-215ENST00000574095 PIGZQ86VD9 579 aa27.42■■□□□ 1.98
NPLOC4-215ENST00000574095 TTC30AQ86WT1 665 aa27.42■■□□□ 1.98
NPLOC4-215ENST00000574095 CAMKK1Q8N5S9 505 aa27.42■■□□□ 1.98
NPLOC4-215ENST00000574095 NAT16Q8N8M0 369 aa27.42■■□□□ 1.98
NPLOC4-215ENST00000574095 USP33Q8TEY7 942 aa27.42■■□□□ 1.98
NPLOC4-215ENST00000574095 DMXL1Q9Y485 3027 aa27.41■■□□□ 1.98
NPLOC4-215ENST00000574095 EML5Q05BV3 1969 aa27.41■■□□□ 1.98
NPLOC4-215ENST00000574095 CD19P15391 556 aa27.41■■□□□ 1.98
NPLOC4-215ENST00000574095 PSEN1P49768 467 aa27.41■■□□□ 1.98
NPLOC4-215ENST00000574095 GOLGA7BQ2TAP0 167 aa27.41■■□□□ 1.98
NPLOC4-215ENST00000574095 C10orf120Q5SQS8 335 aa27.41■■□□□ 1.98
NPLOC4-215ENST00000574095 HTR3DQ70Z44 454 aa27.41■■□□□ 1.98
NPLOC4-215ENST00000574095 TMEM25Q86YD3 366 aa27.41■■□□□ 1.98
NPLOC4-215ENST00000574095 UBR7Q8N806 425 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms