RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 MTF2Q9Y483 593 aaPredicted RBP7.93□□□□□ -1.14
NUP88-205ENST00000572809 USP3Q9Y6I4 520 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 TSC2P49815 1807 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 A8MXQ7 604 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 MAPK13O15264 365 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 NOL4O94818 638 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 CLSTN1O94985 981 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 VNN1O95497 513 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 GLULP15104 373 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 PTPN1P18031 435 aaKnown RBP7.92□□□□□ -1.14
NUP88-205ENST00000572809 BDNFP23560 247 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 NR2F2P24468 414 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 DDX6P26196 483 aaKnown RBP eCLIP7.92□□□□□ -1.14
NUP88-205ENST00000572809 PSMC2P35998 433 aaKnown RBP7.92□□□□□ -1.14
NUP88-205ENST00000572809 AVPR1AP37288 418 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 MAGEA11P43364 429 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 EIF1AXP47813 144 aaKnown RBP7.92□□□□□ -1.14
NUP88-205ENST00000572809 VAMP7P51809 220 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 MLLT6P55198 1093 aaPredicted RBP7.92□□□□□ -1.14
NUP88-205ENST00000572809 CDH8P55286 799 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 PSMC1P62191 440 aaKnown RBP7.92□□□□□ -1.14
NUP88-205ENST00000572809 CYP27A1Q02318 531 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 FCHO2Q0JRZ9 810 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 PNOCQ13519 176 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 NFIL3Q16649 462 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 CCDC142Q17RM4 750 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 ZNF699Q32M78 642 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 ARHGAP29Q52LW3 1261 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 ZNF667Q5HYK9 610 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 TXNDC8Q6A555 127 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 MON1AQ86VX9 555 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 C1orf210Q8IVY1 113 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 CMTM8Q8IZV2 173 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 CELF5Q8N6W0 485 aaKnown RBP7.92□□□□□ -1.14
NUP88-205ENST00000572809 MAB21L3Q8N8X9 362 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 STKLD1Q8NE28 680 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 ENGASEQ8NFI3 743 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 BPIFB1Q8TDL5 484 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 CSGALNACT1Q8TDX6 532 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 MRPS31Q92665 395 aaKnown RBP7.92□□□□□ -1.14
NUP88-205ENST00000572809 MYLPFQ96A32 169 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 RSPRY1Q96DX4 576 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 TRMT2BQ96GJ1 504 aaKnown RBP7.92□□□□□ -1.14
NUP88-205ENST00000572809 PCED1BQ96HM7 432 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 SPATA17Q96L03 361 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 LRRC3BQ96PB8 259 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 RBCK1Q9BYM8 510 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 BCO2Q9BYV7 579 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 LTB4R2Q9NPC1 389 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 RMND1Q9NWS8 449 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 THG1LQ9NWX6 298 aaKnown RBP7.92□□□□□ -1.14
NUP88-205ENST00000572809 NME7Q9Y5B8 376 aa7.92□□□□□ -1.14
NUP88-205ENST00000572809 SHISA7A6NL88 538 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 PROB1E7EW31 1015 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 AKAP3O75969 853 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 SMC2O95347 1197 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 KRT13P13646 458 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 P4HA1P13674 534 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 TARSP26639 723 aaKnown RBP7.91□□□□□ -1.14
NUP88-205ENST00000572809 ANXA13P27216 316 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 NBL1P41271 181 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 MAGEA9P43362 315 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 KPNA1P52294 538 aaPredicted RBP7.91□□□□□ -1.14
NUP88-205ENST00000572809 FAM160A1Q05DH4 1040 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 FZD5Q13467 585 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 HIF1AQ16665 826 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 ZACNQ401N2 412 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 MDH1BQ5I0G3 518 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 C1orf220Q5T0J3 134 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 INTS8Q75QN2 995 aaKnown RBP7.91□□□□□ -1.14
NUP88-205ENST00000572809 FAM186BQ8IYM0 893 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 RGL4Q8IZJ4 473 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 ZDHHC1Q8WTX9 485 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 FAM3CQ92520 227 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 TAF4BQ92750 862 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 CLDN23Q96B33 292 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 ELMO3Q96BJ8 720 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 C8orf48Q96LL4 319 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 CEP295NLQ96MC4 621 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 TIGD1Q96MW7 591 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 GSDMAQ96QA5 445 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 CYP2S1Q96SQ9 504 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 SMG9Q9H0W8 520 aaKnown RBP7.91□□□□□ -1.14
NUP88-205ENST00000572809 C8orf33Q9H7E9 229 aaPredicted RBP7.91□□□□□ -1.14
NUP88-205ENST00000572809 GKN1Q9NS71 199 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 TDP1Q9NUW8 608 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 EHD2Q9NZN4 543 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 HOOK1Q9UJC3 728 aaKnown RBP7.91□□□□□ -1.14
NUP88-205ENST00000572809 NDRG2Q9UN36 371 aaKnown RBP7.91□□□□□ -1.14
NUP88-205ENST00000572809 PCDHA5Q9Y5H7 936 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 PIAS3Q9Y6X2 628 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 NCANO14594 1321 aa7.91□□□□□ -1.14
NUP88-205ENST00000572809 ARNTLO00327 626 aa7.9□□□□□ -1.14
NUP88-205ENST00000572809 CETN3O15182 167 aa7.9□□□□□ -1.14
NUP88-205ENST00000572809 LAMTOR5O43504 91 aa7.9□□□□□ -1.14
NUP88-205ENST00000572809 PRAMEF12O95522 483 aa7.9□□□□□ -1.14
NUP88-205ENST00000572809 HLA-DRAP01903 254 aa7.9□□□□□ -1.14
NUP88-205ENST00000572809 USP17L7P0C7H9 530 aa7.9□□□□□ -1.14
NUP88-205ENST00000572809 SP9P0CG40 484 aa7.9□□□□□ -1.14
NUP88-205ENST00000572809 ZNF16P17020 682 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms