RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 SERPINF2P08697 491 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 ZDHHC11BP0C7U3 371 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 GABRG2P18507 467 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 NTSR1P30989 418 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 SLC5A3P53794 718 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 ATXN3P54252 364 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 CDH8P55286 799 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 RPL6Q02878 288 aaKnown RBP10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 GFPT1Q06210 699 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 SEMA3BQ13214 749 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 STK38Q15208 465 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 DUOXA1Q1HG43 343 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 ANO4Q32M45 955 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 C10orf76Q5T2E6 689 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 PAQR9Q6ZVX9 377 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 RABEPKQ7Z6M1 372 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 FAM35AQ86V20 835 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 TMEM25Q86YD3 366 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 NELFCDQ8IXH7 590 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 HDDC3Q8N4P3 179 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 TERB1Q8NA31 727 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 IQUBQ8NA54 791 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 LINC00301Q8NCQ3 95 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 SCFD1Q8WVM8 642 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 DHX58Q96C10 678 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 SMARCD1Q96GM5 515 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 TNIP3Q96KP6 325 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 C7orf25Q9BPX7 421 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 MED10Q9BTT4 135 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 SMYD3Q9H7B4 428 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 DMAP1Q9NPF5 467 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 GMIPQ9P107 970 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 CALCOCO1Q9P1Z2 691 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 CGNQ9P2M7 1197 aaKnown RBP10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 HCN2Q9UL51 889 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 STARD13Q9Y3M8 1113 aa10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 ATXN2Q99700 1313 aaKnown RBP10.46□□□□□ -0.73
TRAPPC1-205ENST00000572656 TCHHQ07283 1943 aa10.46□□□□□ -0.74
TRAPPC1-205ENST00000572656 DENND4CQ5VZ89 1909 aa10.46□□□□□ -0.74
TRAPPC1-205ENST00000572656 ZZEF1O43149 2961 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 EML5Q05BV3 1969 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 SPAARA0A1B0GVQ0 90 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 A0A1W2PQF6 199 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 SPTLC2O15270 562 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 ZBTB24O43167 697 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 HYAL3O43820 417 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 PPP6R2O75170 966 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 ZNF217O75362 1048 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 HOXB2P14652 356 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 AP3M2P53677 418 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 SIM1P81133 766 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 ZNF33AQ06730 810 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 EHHADHQ08426 723 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 BMT2Q1RMZ1 405 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 ZNF667Q5HYK9 610 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 KIAA1211LQ6NV74 962 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 UNC13DQ70J99 1090 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 HTR3DQ70Z44 454 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 C12orf56Q8IXR9 622 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 FUKQ8N0W3 1084 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 DEFB119Q8N690 84 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 WBP2Q969T9 261 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 INTS4Q96HW7 963 aaKnown RBP10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 GTPBP2Q9BX10 602 aaKnown RBP10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 NACA2Q9H009 215 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 CAPN10Q9HC96 672 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 MSRB2Q9Y3D2 182 aa10.45□□□□□ -0.74
TRAPPC1-205ENST00000572656 IGHV1OR15-9A0A0B4J2B8 117 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 SRRM3A6NNA2 597 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 H0Y626 953 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 ARHGAP33O14559 1287 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 TRIM24O15164 1050 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 STX6O43752 255 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 GREM1O60565 184 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 TLR5O60602 858 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 EXOC3O60645 756 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 OPHN1O60890 802 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 AP1G2O75843 785 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 TRIM16O95361 564 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 IRF1P10914 325 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 RDXP35241 583 aaKnown RBP10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 WASP42768 502 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 CASP4P49662 377 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 CLDN10P78369 228 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 BIRC3Q13489 604 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 NCOA4Q13772 614 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 ZNF699Q32M78 642 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 GRAMD4Q6IC98 578 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 SDE2Q6IQ49 451 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 ACOT1Q86TX2 421 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 MIB1Q86YT6 1006 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 ZMIZ2Q8NF64 920 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 PLEKHO2Q8TD55 490 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 ZCCHC14Q8WYQ9 949 aaKnown RBP10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 XPO6Q96QU8 1125 aaKnown RBP10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 ACOX2Q99424 681 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 SMOQ99835 787 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 KLF16Q9BXK1 252 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 FBXO44Q9H4M3 255 aa10.44□□□□□ -0.74
TRAPPC1-205ENST00000572656 MAGEF1Q9HAY2 307 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms