RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 TWNKQ96RR1 684 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 SH3GL3Q99963 347 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 MRPL4Q9BYD3 311 aaKnown RBP18.16■□□□□ 0.5
SCARF1-205ENST00000571272 ASCC2Q9H1I8 757 aaPredicted RBP18.16■□□□□ 0.5
SCARF1-205ENST00000571272 RSAD1Q9HA92 442 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 SMYD2Q9NRG4 433 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 KCNK4Q9NYG8 393 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 DCAF8L1A6NGE4 600 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 CAPN14A8MX76 684 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 OGTO15294 1046 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 GRAP2O75791 330 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 HOXC6P09630 235 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 CACNA2D1P54289 1103 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 BACE1P56817 501 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 CXCL9Q07325 125 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 NOMO1Q15155 1222 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 ZRSR2Q15696 482 aaKnown RBP18.16■□□□□ 0.5
SCARF1-205ENST00000571272 C15orf59Q2T9L4 293 aaPredicted RBP18.16■□□□□ 0.5
SCARF1-205ENST00000571272 ZPBP2Q6X784 338 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 NUDCD3Q8IVD9 361 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 CFAP61Q8NHU2 1237 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 RILPQ96NA2 401 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 TTC1Q99614 292 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 ZNF184Q99676 751 aaPredicted RBP18.16■□□□□ 0.5
SCARF1-205ENST00000571272 C20orf27Q9GZN8 174 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 ZNF212Q9UDV6 495 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 C1QAP02745 245 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 APRTP07741 180 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 CNTN2Q02246 1040 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 SCUBE1Q8IWY4 988 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.16■□□□□ 0.5
SCARF1-205ENST00000571272 ACO2Q99798 780 aaKnown RBP18.16■□□□□ 0.5
SCARF1-205ENST00000571272 ADPGKQ9BRR6 497 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 PCMTD2Q9NV79 361 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 KLF11O14901 512 aa18.15■□□□□ 0.5
SCARF1-205ENST00000571272 BAG2O95816 211 aa18.15■□□□□ 0.5
SCARF1-205ENST00000571272 SARNPP82979 210 aaKnown RBP18.15■□□□□ 0.5
SCARF1-205ENST00000571272 MROH9Q5TGP6 573 aa18.15■□□□□ 0.5
SCARF1-205ENST00000571272 RIPOR1Q6ZS17 1223 aa18.15■□□□□ 0.5
SCARF1-205ENST00000571272 LRRC71Q8N4P6 559 aa18.15■□□□□ 0.5
SCARF1-205ENST00000571272 RNF149Q8NC42 400 aa18.15■□□□□ 0.5
SCARF1-205ENST00000571272 UBA3Q8TBC4 463 aa18.15■□□□□ 0.5
SCARF1-205ENST00000571272 ZBED3Q96IU2 234 aaPredicted RBP18.15■□□□□ 0.5
SCARF1-205ENST00000571272 PANX3Q96QZ0 392 aa18.15■□□□□ 0.5
SCARF1-205ENST00000571272 PCYT2Q99447 389 aa18.15■□□□□ 0.5
SCARF1-205ENST00000571272 LHX5Q9H2C1 402 aa18.15■□□□□ 0.5
SCARF1-205ENST00000571272 GPATCH2LQ9NWQ4 482 aa18.15■□□□□ 0.5
SCARF1-205ENST00000571272 CPSF3Q9UKF6 684 aaKnown RBP18.15■□□□□ 0.5
SCARF1-205ENST00000571272 A8MXQ7 604 aa18.15■□□□□ 0.5
SCARF1-205ENST00000571272 MED7O43513 233 aa18.15■□□□□ 0.5
SCARF1-205ENST00000571272 RFPL1O75677 317 aa18.15■□□□□ 0.5
SCARF1-205ENST00000571272 RAP1GDS1P52306 607 aa18.15■□□□□ 0.5
SCARF1-205ENST00000571272 FOXB2Q5VYV0 432 aa18.15■□□□□ 0.5
SCARF1-205ENST00000571272 CCNJLQ8IV13 435 aa18.15■□□□□ 0.5
SCARF1-205ENST00000571272 AGBL3Q8NEM8 1001 aa18.15■□□□□ 0.5
SCARF1-205ENST00000571272 NIFKQ9BYG3 293 aaKnown RBP18.15■□□□□ 0.5
SCARF1-205ENST00000571272 SDCBP2Q9H190 292 aa18.15■□□□□ 0.5
SCARF1-205ENST00000571272 PLAC1Q9HBJ0 212 aa18.15■□□□□ 0.5
SCARF1-205ENST00000571272 FER1L6Q2WGJ9 1857 aa18.15■□□□□ 0.5
SCARF1-205ENST00000571272 PEX10O60683 326 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 TNNC2P02585 160 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 PRKCBP05771 671 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 RBL1P28749 1068 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 UBAP2LQ14157 1087 aaKnown RBP18.14■□□□□ 0.49
SCARF1-205ENST00000571272 C11orf91Q3C1V1 193 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 ATG16L1Q676U5 607 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 SHKBP1Q8TBC3 707 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 EBF4Q9BQW3 602 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 ACAD9Q9H845 621 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 USP29Q9HBJ7 922 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 POPDC2Q9HBU9 364 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 PRR5-ARHGAP8B1AHC4 643 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 SPECC1L-ADORA2AF8WAN1 911 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 M0QYV0 167 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 CHADO15335 359 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 SPAG6O75602 509 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 USP1O94782 785 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 ZCCHC18P0CG32 403 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 CSH1P0DML2 217 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 CSH2P0DML3 217 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 HMGB2P26583 209 aaKnown RBP18.14■□□□□ 0.49
SCARF1-205ENST00000571272 POLE2P56282 527 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 ARHGAP8P85298 464 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 STXBP2Q15833 593 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 TMEM132AQ24JP5 1023 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 SCYL2Q6P3W7 929 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 TRMT10BQ6PF06 316 aaKnown RBP18.14■□□□□ 0.49
SCARF1-205ENST00000571272 CAND1Q86VP6 1230 aaKnown RBP18.14■□□□□ 0.49
SCARF1-205ENST00000571272 NIM1KQ8IY84 436 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 TMEM192Q8IY95 271 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 ULK2Q8IYT8 1036 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 NDUFAF2Q8N183 169 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 PIWIL1Q96J94 861 aaKnown RBP18.14■□□□□ 0.49
SCARF1-205ENST00000571272 C7orf26Q96N11 449 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 SMYD3Q9H7B4 428 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 SLC7A8Q9UHI5 535 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 MAD1L1Q9Y6D9 718 aa18.14■□□□□ 0.49
SCARF1-205ENST00000571272 COL11A1P12107 1806 aaPredicted RBP18.13■□□□□ 0.49
SCARF1-205ENST00000571272 MEI4A8MW99 385 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 MAGEC1O60732 1142 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms