RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 ATRIPQ8WXE1 791 aa5.71□□□□□ -1.5
CHD3-212ENST00000570758 NDRG1Q92597 394 aaKnown RBP5.71□□□□□ -1.5
CHD3-212ENST00000570758 CD101Q93033 1021 aa5.71□□□□□ -1.5
CHD3-212ENST00000570758 MED15Q96RN5 788 aa5.71□□□□□ -1.5
CHD3-212ENST00000570758 KLF16Q9BXK1 252 aaPredicted RBP5.71□□□□□ -1.5
CHD3-212ENST00000570758 DUSP16Q9BY84 665 aa5.71□□□□□ -1.5
CHD3-212ENST00000570758 EPC1Q9H2F5 836 aa5.71□□□□□ -1.5
CHD3-212ENST00000570758 FBXO44Q9H4M3 255 aa5.71□□□□□ -1.5
CHD3-212ENST00000570758 METTL14Q9HCE5 456 aaKnown RBP5.71□□□□□ -1.5
CHD3-212ENST00000570758 PNPLA8Q9NP80 782 aa5.71□□□□□ -1.5
CHD3-212ENST00000570758 KIAA1468Q9P260 1216 aa5.71□□□□□ -1.5
CHD3-212ENST00000570758 NUDT5Q9UKK9 219 aa5.71□□□□□ -1.5
CHD3-212ENST00000570758 SMG5Q9UPR3 1016 aaKnown RBP5.71□□□□□ -1.5
CHD3-212ENST00000570758 BICDL2A1A5D9 508 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 K7EQS6 105 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 RNF225M0QZC1 329 aaPredicted RBP5.7□□□□□ -1.5
CHD3-212ENST00000570758 SLC9A3R1O14745 358 aaPredicted RBP5.7□□□□□ -1.5
CHD3-212ENST00000570758 PMM2O15305 246 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 HRO43593 1189 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 GABBR2O75899 941 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 ADH5P11766 374 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 RARGP13631 454 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 TRIM21P19474 475 aaKnown RBP5.7□□□□□ -1.5
CHD3-212ENST00000570758 DRD1P21728 446 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 HOXA6P31267 233 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 PXNP49023 591 aaPredicted RBP5.7□□□□□ -1.5
CHD3-212ENST00000570758 TUBP50607 506 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 NRLP54845 237 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 AMPD2Q01433 879 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 PDE4CQ08493 712 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 KCNH2Q12809 1159 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 NR1H3Q13133 447 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 LPAL2Q16609 132 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 LY6G5CQ5SRR4 150 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 BHLHA9Q7RTU4 235 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 CCDC186Q7Z3E2 898 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 PIGZQ86VD9 579 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 WDR5BQ86VZ2 330 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 DDX42Q86XP3 938 aaKnown RBP eCLIP5.7□□□□□ -1.5
CHD3-212ENST00000570758 TMEM25Q86YD3 366 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 BBS7Q8IWZ6 715 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 TTC39CQ8N584 583 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 KIAA1958Q8N8K9 716 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 TRIML1Q8N9V2 468 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 ANKRD52Q8NB46 1076 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 RPLP0P6Q8NHW5 317 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 UBA3Q8TBC4 463 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 TFAP2BQ92481 460 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 P2RY11Q96G91 374 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 KREMEN1Q96MU8 473 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 ZSWIM1Q9BR11 485 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 SRRTQ9BXP5 876 aaKnown RBP5.7□□□□□ -1.5
CHD3-212ENST00000570758 FAM126AQ9BYI3 521 aaPredicted RBP5.7□□□□□ -1.5
CHD3-212ENST00000570758 ULBP1Q9BZM6 244 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 CYLDQ9NQC7 956 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 TLR8Q9NR97 1041 aaKnown RBP5.7□□□□□ -1.5
CHD3-212ENST00000570758 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.7□□□□□ -1.5
CHD3-212ENST00000570758 SH3BP1Q9Y3L3 701 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 PCDHB4Q9Y5E5 795 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 USP3Q9Y6I4 520 aa5.7□□□□□ -1.5
CHD3-212ENST00000570758 MYO16Q9Y6X6 1858 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 O00370 1275 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 XPO1O14980 1071 aaKnown RBP5.69□□□□□ -1.5
CHD3-212ENST00000570758 TRIM24O15164 1050 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 P4HA2O15460 535 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 HOXC11O43248 304 aaPredicted RBP5.69□□□□□ -1.5
CHD3-212ENST00000570758 GNA14O95837 355 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 ADH1CP00326 375 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 AFPP02771 609 aaKnown RBP5.69□□□□□ -1.5
CHD3-212ENST00000570758 VDRP11473 427 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 HNRNPLP14866 589 aaKnown RBP eCLIP5.69□□□□□ -1.5
CHD3-212ENST00000570758 CD19P15391 556 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 TBXAS1P24557 533 aaPredicted RBP5.69□□□□□ -1.5
CHD3-212ENST00000570758 BRD2P25440 801 aaKnown RBP5.69□□□□□ -1.5
CHD3-212ENST00000570758 ATP5C1P36542 298 aaKnown RBP5.69□□□□□ -1.5
CHD3-212ENST00000570758 ZNF132P52740 706 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 SEC13P55735 322 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 MARSP56192 900 aaKnown RBP5.69□□□□□ -1.5
CHD3-212ENST00000570758 YWHAEP62258 255 aaKnown RBP5.69□□□□□ -1.5
CHD3-212ENST00000570758 KDSRQ06136 332 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 DMC1Q14565 340 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 PPP2R5DQ14738 602 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 FBXO43Q4G163 708 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 PKDCCQ504Y2 493 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 SGO2Q562F6 1265 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 RAB41Q5JT25 222 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 C10orf120Q5SQS8 335 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 KLHDC10Q6PID8 442 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 TMEM270Q6UE05 265 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 Q6ZNB5 142 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 HTR3DQ70Z44 454 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 RRAGAQ7L523 313 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 LONP2Q86WA8 852 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 IRF2BP1Q8IU81 584 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 ETFBKMTQ8IXQ9 262 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 KIAA2013Q8IYS2 634 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 PPM1KQ8N3J5 372 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 PHTF2Q8N3S3 785 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 NAT16Q8N8M0 369 aa5.69□□□□□ -1.5
CHD3-212ENST00000570758 RBBP8NLQ8NC74 664 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms