RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 ZNF564Q8TBZ8 553 aaPredicted RBP6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 SLC35F5Q8WV83 523 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 KCTD13Q8WZ19 329 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 FBXO32Q969P5 355 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 VCPIP1Q96JH7 1222 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 CEP295NLQ96MC4 621 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 MCEEQ96PE7 176 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 SLITRK1Q96PX8 696 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 KCNK16Q96T55 309 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 CDCA3Q99618 268 aaPredicted RBP6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 SMOQ99835 787 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 PACSIN1Q9BY11 444 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 THAP2Q9H0W7 228 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 ISCUQ9H1K1 167 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 PLEKHA4Q9H4M7 779 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 NSUN3Q9H649 340 aaKnown RBP6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 TLE6Q9H808 572 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 CSNK1G1Q9HCP0 422 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 LZTFL1Q9NQ48 299 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 CNGB3Q9NQW8 809 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 MAN1C1Q9NR34 630 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 METTL5Q9NRN9 209 aaKnown RBP6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 PARVAQ9NVD7 372 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 DZANK1Q9NVP4 752 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 TAS2R14Q9NYV8 317 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 UXTQ9UBK9 157 aaPredicted RBP6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 LCMT1Q9UIC8 334 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 PYCARDQ9ULZ3 195 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 MAGED2Q9UNF1 606 aaPredicted RBP6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 PCDHGC5Q9Y5F6 944 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 NCANO14594 1321 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 COL4A4P53420 1690 aaPredicted RBP6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 TULP2O00295 520 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 CAPN9O14815 690 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 KIF5CO60282 957 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 HSF2BPO75031 334 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 SOAT2O75908 522 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 ABLIM3O94929 683 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 ZBED1O96006 694 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 C1RP00736 705 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 ERBB2P04626 1255 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 ATF6P18850 670 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 IGFBP4P22692 258 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 RRM1P23921 792 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 YWHAQP27348 245 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 SCNN1AP37088 669 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 NRIP1P48552 1158 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 GPR15P49685 360 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 CLCN4P51793 760 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 CACNA2D1P54289 1103 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 ZNF268Q14587 947 aaPredicted RBP6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 DDR2Q16832 855 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 C2CD6Q53TS8 623 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 EFHC1Q5JVL4 640 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 SDHAF4Q5VUM1 108 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 PMF1Q6P1K2 205 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 FAM183BPQ6ZVS7 135 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 PAQR9Q6ZVX9 377 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 RTL10Q7L3V2 364 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 RSRC2Q7L4I2 434 aaKnown RBP6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 TADA2BQ86TJ2 420 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 ZSCAN30Q86W11 494 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 XYLT1Q86Y38 959 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 NUP93Q8N1F7 819 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 MICALL1Q8N3F8 863 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 GIPC2Q8TF65 315 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 IRGQQ8WZA9 623 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 CASP10Q92851 521 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 SPATA17Q96L03 361 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 CALR3Q96L12 384 aaKnown RBP6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 ZNF512Q96ME7 567 aaPredicted RBP6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 NUP85Q9BW27 656 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 ULBP1Q9BZM6 244 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 UBXN6Q9BZV1 441 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 NACA2Q9H009 215 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 PRDM12Q9H4Q4 367 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 AVENQ9NQS1 362 aaPredicted RBP6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 ZDHHC7Q9NXF8 308 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 TRMT1Q9NXH9 659 aaKnown RBP6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 UVRAGQ9P2Y5 699 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 CYTH4Q9UIA0 394 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 ANAPC7Q9UJX3 599 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 STAP1Q9ULZ2 295 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 GUCA1BQ9UMX6 200 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 ASB3Q9Y575 518 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 KIAA1671Q9BY89 1806 aa6.91□□□□□ -1.3
CTDNEP1-204ENST00000570484 A0A0A6YYK5 440 aaPredicted RBP6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 EPOPA6NHQ4 379 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 SLC38A8A6NNN8 435 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 BTNL10A8MVZ5 291 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 ZNF263O14978 683 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 PER2O15055 1255 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 CCL16O15467 120 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 PAPSS1O43252 624 aaPredicted RBP6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 BUB1O43683 1085 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 CLASP2O75122 1294 aaKnown RBP6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 DAB1O75553 588 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 BEST1O76090 585 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 SEC24AO95486 1093 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 FGF19O95750 216 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms