RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	LRRC32	Q14392	662 aa		18.92	■□□□□ 0.62
PKD1-238	ENST00000570150	ZNF77	Q15935	545 aa		18.92	■□□□□ 0.62
PKD1-238	ENST00000570150	PM20D1	Q6GTS8	502 aa		18.92	■□□□□ 0.62
PKD1-238	ENST00000570150	TPRG1	Q6ZUI0	275 aa		18.92	■□□□□ 0.62
PKD1-238	ENST00000570150	C11orf57	Q6ZUT1	292 aa	Predicted RBP	18.92	■□□□□ 0.62
PKD1-238	ENST00000570150	SYNPO	Q8N3V7	929 aa		18.92	■□□□□ 0.62
PKD1-238	ENST00000570150	MSANTD4	Q8NCY6	345 aa		18.92	■□□□□ 0.62
PKD1-238	ENST00000570150	FAM83C	Q9BQN1	747 aa		18.92	■□□□□ 0.62
PKD1-238	ENST00000570150	GKN1	Q9NS71	199 aa		18.92	■□□□□ 0.62
PKD1-238	ENST00000570150	SH3BP1	Q9Y3L3	701 aa		18.92	■□□□□ 0.62
PKD1-238	ENST00000570150	KRBA1	A5PL33	1030 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	LGALS16	A8MUM7	142 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	ARNTL	O00327	626 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	KRT9	P35527	623 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	RPS9	P46781	194 aa	Known RBP	18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	RUNX3	Q13761	415 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	PPP2R5D	Q14738	602 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	ARHGAP44	Q17R89	818 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	PKDCC	Q504Y2	493 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	HSP90AA4P	Q58FG1	418 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	KLHDC7A	Q5VTJ3	777 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	RSRC2	Q7L4I2	434 aa	Known RBP	18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	TTC30A	Q86WT1	665 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	PJA1	Q8NG27	643 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	SLC35F5	Q8WV83	523 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	FAM3C	Q92520	227 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	CYP2S1	Q96SQ9	504 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	STK33	Q9BYT3	514 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	DCLK3	Q9C098	648 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	SMOC2	Q9H3U7	446 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	HEBP1	Q9NRV9	189 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	TAB2	Q9NYJ8	693 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	CPQ	Q9Y646	472 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	PTPRD	P23468	1912 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	MYO10	Q9HD67	2058 aa		18.91	■□□□□ 0.62
PKD1-238	ENST00000570150	LEFTY2	O00292	366 aa		18.9	■□□□□ 0.62
PKD1-238	ENST00000570150	COCH	O43405	550 aa		18.9	■□□□□ 0.62
PKD1-238	ENST00000570150	THAP12	O43422	761 aa		18.9	■□□□□ 0.62
PKD1-238	ENST00000570150	UCHL3	P15374	230 aa		18.9	■□□□□ 0.62
PKD1-238	ENST00000570150	ZNF18	P17022	549 aa		18.9	■□□□□ 0.62
PKD1-238	ENST00000570150	DGKK	Q5KSL6	1271 aa		18.9	■□□□□ 0.62
PKD1-238	ENST00000570150	BTBD8	Q5XKL5	378 aa		18.9	■□□□□ 0.62
PKD1-238	ENST00000570150	POTEH	Q6S545	545 aa		18.9	■□□□□ 0.62
PKD1-238	ENST00000570150	NUDT18	Q6ZVK8	323 aa		18.9	■□□□□ 0.62
PKD1-238	ENST00000570150	AOPEP	Q8N6M6	819 aa		18.9	■□□□□ 0.62
PKD1-238	ENST00000570150	RNF139	Q8WU17	664 aa		18.9	■□□□□ 0.62
PKD1-238	ENST00000570150	ZNF606	Q8WXB4	792 aa		18.9	■□□□□ 0.62
PKD1-238	ENST00000570150	KAT5	Q92993	513 aa		18.9	■□□□□ 0.62
PKD1-238	ENST00000570150	VPS16	Q9H269	839 aa		18.9	■□□□□ 0.62
PKD1-238	ENST00000570150	LHX5	Q9H2C1	402 aa		18.9	■□□□□ 0.62
PKD1-238	ENST00000570150	ABCC13	Q9NSE7	274 aa		18.9	■□□□□ 0.62
PKD1-238	ENST00000570150	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	18.9	■□□□□ 0.62
PKD1-238	ENST00000570150	PCDHGC3	Q9UN70	934 aa		18.9	■□□□□ 0.62
PKD1-238	ENST00000570150	CCL26	Q9Y258	94 aa		18.9	■□□□□ 0.62
PKD1-238	ENST00000570150	NUP210	Q8TEM1	1887 aa	Predicted RBP	18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	GOLGA6L19	H0YKK7	550 aa		18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	NRG2	O14511	850 aa	Predicted RBP	18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	CYP26A1	O43174	497 aa		18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	ADH1C	P00326	375 aa		18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	RARG	P13631	454 aa		18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	COPB1	P53618	953 aa	Known RBP	18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	PTPN5	P54829	565 aa		18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	YWHAG	P61981	247 aa	Known RBP eCLIP	18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	UBXN1	Q04323	297 aa		18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	RAPGEF1	Q13905	1077 aa		18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	UBXN2B	Q14CS0	331 aa		18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	C10orf120	Q5SQS8	335 aa		18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	ZNF677	Q86XU0	584 aa		18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	FAM71A	Q8IYT1	594 aa		18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	NEK11	Q8NG66	645 aa		18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	RSPRY1	Q96DX4	576 aa		18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	PCMTD1	Q96MG8	357 aa	Predicted RBP	18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	SPAG5	Q96R06	1193 aa		18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	SMG9	Q9H0W8	520 aa	Known RBP	18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	PDCL3	Q9H2J4	239 aa		18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	LTB4R2	Q9NPC1	389 aa		18.89	■□□□□ 0.61
PKD1-238	ENST00000570150	FAM170B	A6NMN3	283 aa		18.88	■□□□□ 0.61
PKD1-238	ENST00000570150	RNF225	M0QZC1	329 aa	Predicted RBP	18.88	■□□□□ 0.61
PKD1-238	ENST00000570150	TPM3	P06753	285 aa		18.88	■□□□□ 0.61
PKD1-238	ENST00000570150	BRD2	P25440	801 aa	Known RBP	18.88	■□□□□ 0.61
PKD1-238	ENST00000570150	ADIG	Q0VDE8	80 aa		18.88	■□□□□ 0.61
PKD1-238	ENST00000570150	GRSF1	Q12849	480 aa	Known RBP eCLIP	18.88	■□□□□ 0.61
PKD1-238	ENST00000570150	MTA1	Q13330	715 aa		18.88	■□□□□ 0.61
PKD1-238	ENST00000570150	FBXO43	Q4G163	708 aa		18.88	■□□□□ 0.61
PKD1-238	ENST00000570150	BEND5	Q7L4P6	421 aa		18.88	■□□□□ 0.61
PKD1-238	ENST00000570150	GPRIN1	Q7Z2K8	1008 aa		18.88	■□□□□ 0.61
PKD1-238	ENST00000570150	UBA3	Q8TBC4	463 aa		18.88	■□□□□ 0.61
PKD1-238	ENST00000570150	TFAP2B	Q92481	460 aa		18.88	■□□□□ 0.61
PKD1-238	ENST00000570150	SECISBP2L	Q93073	1101 aa	Known RBP	18.88	■□□□□ 0.61
PKD1-238	ENST00000570150	ERGIC2	Q96RQ1	377 aa		18.88	■□□□□ 0.61
PKD1-238	ENST00000570150	SLC22A12	Q96S37	553 aa		18.88	■□□□□ 0.61
PKD1-238	ENST00000570150	LSM14B	Q9BX40	385 aa	Known RBP	18.88	■□□□□ 0.61
PKD1-238	ENST00000570150	RNF38	Q9H0F5	515 aa		18.88	■□□□□ 0.61
PKD1-238	ENST00000570150	SIX2	Q9NPC8	291 aa		18.88	■□□□□ 0.61
PKD1-238	ENST00000570150	CFAP97	Q9P2B7	532 aa		18.88	■□□□□ 0.61
PKD1-238	ENST00000570150	ZNF318	Q5VUA4	2279 aa		18.88	■□□□□ 0.61
PKD1-238	ENST00000570150		A0A1W2PQH9	124 aa		18.87	■□□□□ 0.61
PKD1-238	ENST00000570150	SYCE3	A1L190	88 aa		18.87	■□□□□ 0.61
PKD1-238	ENST00000570150	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	18.87	■□□□□ 0.61
PKD1-238	ENST00000570150	SPECC1L-ADORA2A	F8WAN1	911 aa		18.87	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms