RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 TRIM6Q9C030 488 aaPredicted RBP5.63□□□□□ -1.51
SF3B3-213ENST00000569687 FAM107BQ9H098 131 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 CDC42EP4Q9H3Q1 356 aaKnown RBP5.63□□□□□ -1.51
SF3B3-213ENST00000569687 METTL5Q9NRN9 209 aaKnown RBP5.63□□□□□ -1.51
SF3B3-213ENST00000569687 NINJ2Q9NZG7 142 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 BCCIPQ9P287 314 aaKnown RBP eCLIP5.63□□□□□ -1.51
SF3B3-213ENST00000569687 HESX1Q9UBX0 185 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 TJP2Q9UDY2 1190 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 TUBGCP4Q9UGJ1 667 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 FETUBQ9UGM5 382 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 EGFL7Q9UHF1 273 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 SHOC2Q9UQ13 582 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 NOD1Q9Y239 953 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 VPS9D1Q9Y2B5 631 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 ACTL7BQ9Y614 415 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 THSD7BQ9C0I4 1608 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 A8MXQ7 604 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 DCDC2CA8MYV0 355 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 E7ESA3 106 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 APOC4-APOC2K7ER74 178 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 TNPO2O14787 897 aaKnown RBP5.62□□□□□ -1.51
SF3B3-213ENST00000569687 PPEF2O14830 753 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 MDM4O15151 490 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 PRPSAP2O60256 369 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 ICMTO60725 284 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 HUS1O60921 280 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 FAM107AO95990 144 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 APOC2P02655 101 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 AKAP5P24588 427 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 CTGFP29279 349 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 ATP5DP30049 168 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 RDXP35241 583 aaKnown RBP5.62□□□□□ -1.51
SF3B3-213ENST00000569687 RPL22P35268 128 aaKnown RBP5.62□□□□□ -1.51
SF3B3-213ENST00000569687 CHKAP35790 457 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 MAGEA6P43360 314 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 NR2C2P49116 596 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 TAF6P49848 677 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 BCAT1P54687 386 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 MRPS6P82932 125 aaKnown RBP5.62□□□□□ -1.51
SF3B3-213ENST00000569687 ZNF200P98182 395 aaPredicted RBP5.62□□□□□ -1.51
SF3B3-213ENST00000569687 BEX3Q00994 111 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 OTUD4Q01804 1114 aaKnown RBP5.62□□□□□ -1.51
SF3B3-213ENST00000569687 BST2Q10589 180 aaKnown RBP5.62□□□□□ -1.51
SF3B3-213ENST00000569687 GPS1Q13098 491 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 ORC1Q13415 861 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 XRCC4Q13426 336 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 TRIP13Q15645 432 aaPredicted RBP5.62□□□□□ -1.51
SF3B3-213ENST00000569687 OCLNQ16625 522 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 KCTD19Q17RG1 926 aaPredicted RBP5.62□□□□□ -1.51
SF3B3-213ENST00000569687 GOLGA7BQ2TAP0 167 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 P3H1Q32P28 736 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 KCNT1Q5JUK3 1230 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 EFHC1Q5JVL4 640 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 ZFYVE27Q5T4F4 411 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 FAM102AQ5T9C2 384 aaPredicted RBP5.62□□□□□ -1.51
SF3B3-213ENST00000569687 MFSD14CQ5VZR4 134 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 KAZNQ674X7 775 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 SLC9A4Q6AI14 798 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 TRNP1Q6NT89 227 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 FOXR1Q6PIV2 292 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 C6orf89Q6UWU4 347 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 C4orf22Q6V702 233 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 TAOK1Q7L7X3 1001 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 YTHDF3Q7Z739 585 aaKnown RBP5.62□□□□□ -1.51
SF3B3-213ENST00000569687 RSPH3Q86UC2 560 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 EXOC3L1Q86VI1 746 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 FAM228AQ86W67 206 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 SCUBE3Q8IX30 993 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 HACE1Q8IYU2 909 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 RIBC1Q8N443 379 aaPredicted RBP5.62□□□□□ -1.51
SF3B3-213ENST00000569687 PLD5Q8N7P1 536 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 NAT8LQ8N9F0 302 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 ARRDC4Q8NCT1 418 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 GSTCDQ8NEC7 633 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 KLHDC9Q8NEP7 349 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 APPL2Q8NEU8 664 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 OR6B3Q8NGW1 331 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 ADAM32Q8TC27 787 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 SPATA18Q8TC71 538 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 MAML1Q92585 1016 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 PRCCQ92733 491 aaPredicted RBP5.62□□□□□ -1.51
SF3B3-213ENST00000569687 NT5C3BQ969T7 300 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 RTP4Q96DX8 246 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 TNIP3Q96KP6 325 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 ZFRQ96KR1 1074 aaKnown RBP5.62□□□□□ -1.51
SF3B3-213ENST00000569687 CFAP57Q96MR6 1250 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 XPO6Q96QU8 1125 aaKnown RBP5.62□□□□□ -1.51
SF3B3-213ENST00000569687 PEBP4Q96S96 227 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 RBM15Q96T37 977 aaKnown RBP eCLIP5.62□□□□□ -1.515e-11■■□□□ 14.1
SF3B3-213ENST00000569687 MAK16Q9BXY0 300 aaKnown RBP5.62□□□□□ -1.51
SF3B3-213ENST00000569687 DUSP16Q9BY84 665 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 FRMD8Q9BZ67 464 aaPredicted RBP5.62□□□□□ -1.51
SF3B3-213ENST00000569687 SNX25Q9H3E2 840 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 CENPHQ9H3R5 247 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 NXF3Q9H4D5 531 aaKnown RBP5.62□□□□□ -1.51
SF3B3-213ENST00000569687 ZWILCHQ9H900 591 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 USP29Q9HBJ7 922 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 LRRC4CQ9HCJ2 640 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 SLC38A7Q9NVC3 462 aa5.62□□□□□ -1.51
SF3B3-213ENST00000569687 EURLQ9NYK6 297 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 179.4 ms