RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 TAF3Q5VWG9 929 aa13.56□□□□□ -0.24
CNEP1R1-211ENST00000569647 HGSNATQ68CP4 663 aa13.56□□□□□ -0.24
CNEP1R1-211ENST00000569647 PIGZQ86VD9 579 aa13.56□□□□□ -0.24
CNEP1R1-211ENST00000569647 NUP93Q8N1F7 819 aa13.56□□□□□ -0.24
CNEP1R1-211ENST00000569647 WDTC1Q8N5D0 677 aa13.56□□□□□ -0.24
CNEP1R1-211ENST00000569647 SCAMP5Q8TAC9 235 aa13.56□□□□□ -0.24
CNEP1R1-211ENST00000569647 KCTD13Q8WZ19 329 aa13.56□□□□□ -0.24
CNEP1R1-211ENST00000569647 PHOX2BQ99453 314 aa13.56□□□□□ -0.24
CNEP1R1-211ENST00000569647 ARHGEF3Q9NR81 526 aa13.56□□□□□ -0.24
CNEP1R1-211ENST00000569647 ECI2O75521 394 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 TADA3O75528 432 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 GABBR2O75899 941 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 RTN3O95197 1032 aaPredicted RBP13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 LSM8O95777 96 aaKnown RBP13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 F11P03951 625 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 TPM1P09493 284 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 MYL4P12829 197 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 FCARP24071 287 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 KIF11P52732 1056 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 NOMO3P69849 1222 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 GOLGA8FQ08AF8 430 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 GOLGA8DPQ0D2H9 430 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 TANGO2Q6ICL3 276 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 PMF1Q6P1K2 205 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 GAREM2Q75VX8 874 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 TMEM150AQ86TG1 271 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 PASD1Q8IV76 773 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 LEMD2Q8NC56 503 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 STK32AQ8WU08 396 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 ZSWIM3Q96MP5 696 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 ASB16Q96NS5 453 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 AGPAT1Q99943 283 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 SLC4A5Q9BY07 1137 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 PLA2G2FQ9BZM2 168 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 TBC1D17Q9HA65 648 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 CYLDQ9NQC7 956 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 COMMD8Q9NX08 183 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 UXTQ9UBK9 157 aaPredicted RBP13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 USP3Q9Y6I4 520 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 COL4A2P08572 1712 aa13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 KIF26AQ9ULI4 1882 aaPredicted RBP13.55□□□□□ -0.24
CNEP1R1-211ENST00000569647 ZFHX2Q9C0A1 2572 aaPredicted RBP13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 H0Y858 1186 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 STK25O00506 426 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 FGF19O95750 216 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 CYP1A1P04798 512 aaPredicted RBP13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 GJA1P17302 382 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 YWHAQP27348 245 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 RGS7P49802 495 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 MRE11P49959 708 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 ADKP55263 362 aaKnown RBP13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 KLHL30Q0D2K2 578 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 PDCLQ13371 301 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 TAF12Q16514 161 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 FAM78AQ5JUQ0 283 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 WDR59Q6PJI9 974 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 TRIM72Q6ZMU5 477 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 ZNF571Q7Z3V5 609 aaPredicted RBP13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 ALYREFQ86V81 257 aaKnown RBP13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 CNGA4Q8IV77 575 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 PIAS4Q8N2W9 510 aaPredicted RBP13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 TC2NQ8N9U0 490 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 TMEM35BQ8NCS4 154 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 C1orf131Q8NDD1 294 aaKnown RBP13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 OR8K1Q8NGG5 319 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 SHKBP1Q8TBC3 707 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 ELSPBP1Q96BH3 223 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 HSFY1Q96LI6 401 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 PCDHB18PQ96TA0 734 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 FBXO44Q9H4M3 255 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 HAUS4Q9H6D7 363 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 ABHD10Q9NUJ1 306 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 FAM86C1Q9NVL1 165 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 EHD2Q9NZN4 543 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 MAGED2Q9UNF1 606 aaPredicted RBP13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 NCANO14594 1321 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 FANCMQ8IYD8 2048 aa13.54□□□□□ -0.24
CNEP1R1-211ENST00000569647 A0A1W2PRU2 124 aa13.53□□□□□ -0.24
CNEP1R1-211ENST00000569647 AKR1B15C9JRZ8 316 aaPredicted RBP13.53□□□□□ -0.24
CNEP1R1-211ENST00000569647 SERPING1P05155 500 aa13.53□□□□□ -0.24
CNEP1R1-211ENST00000569647 SKILP12757 684 aa13.53□□□□□ -0.24
CNEP1R1-211ENST00000569647 GABRR2P28476 465 aa13.53□□□□□ -0.24
CNEP1R1-211ENST00000569647 CDC25CP30307 473 aa13.53□□□□□ -0.24
CNEP1R1-211ENST00000569647 TKTL1P51854 596 aa13.53□□□□□ -0.24
CNEP1R1-211ENST00000569647 STARD6P59095 220 aa13.53□□□□□ -0.24
CNEP1R1-211ENST00000569647 ADIGQ0VDE8 80 aa13.53□□□□□ -0.24
CNEP1R1-211ENST00000569647 IFRD2Q12894 506 aaPredicted RBP13.53□□□□□ -0.24
CNEP1R1-211ENST00000569647 TAF10Q12962 218 aa13.53□□□□□ -0.24
CNEP1R1-211ENST00000569647 TEAD2Q15562 447 aa13.53□□□□□ -0.24
CNEP1R1-211ENST00000569647 PTPN20Q4JDL3 420 aa13.53□□□□□ -0.24
CNEP1R1-211ENST00000569647 PM20D1Q6GTS8 502 aa13.53□□□□□ -0.24
CNEP1R1-211ENST00000569647 BHLHA9Q7RTU4 235 aa13.53□□□□□ -0.24
CNEP1R1-211ENST00000569647 CCDC186Q7Z3E2 898 aa13.53□□□□□ -0.24
CNEP1R1-211ENST00000569647 TMEM110Q86TL2 294 aa13.53□□□□□ -0.24
CNEP1R1-211ENST00000569647 DRC7Q8IY82 874 aa13.53□□□□□ -0.24
CNEP1R1-211ENST00000569647 SCML4Q8N228 414 aa13.53□□□□□ -0.24
CNEP1R1-211ENST00000569647 OVCA2Q8WZ82 227 aa13.53□□□□□ -0.24
CNEP1R1-211ENST00000569647 SMARCD2Q92925 531 aa13.53□□□□□ -0.24
CNEP1R1-211ENST00000569647 FBXO32Q969P5 355 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms