RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 E2F7Q96AV8 911 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 SHDQ96IW2 340 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 ZSWIM1Q9BR11 485 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 ULBP1Q9BZM6 244 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 MIS12Q9H081 205 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 TRPV4Q9HBA0 871 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 LRRC4Q9HBW1 653 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 CSNK1G1Q9HCP0 422 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 TLR8Q9NR97 1041 aaKnown RBP9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 ST7Q9NRC1 585 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 OSER1Q9NX31 292 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 RASAL2Q9UJF2 1139 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 ATG2BQ96BY7 2078 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 MIA3Q5JRA6 1907 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 SPECC1L-ADORA2AF8WAN1 911 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 O00370 1275 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 TLR5O60602 858 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 AOC1P19801 751 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 WEE1P30291 646 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 KIF11P52732 1056 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 MFAP3P55082 362 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 STARD6P59095 220 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 FCHO2Q0JRZ9 810 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 EFEMP1Q12805 493 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 RUNX3Q13761 415 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 KRT31Q15323 416 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 ZNF77Q15935 545 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 ARHGAP17Q68EM7 881 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 DENND1BQ6P3S1 775 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 TXNDC11Q6PKC3 985 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 TSSK4Q6SA08 328 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 ZNF852Q6ZMS4 543 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 TTC39CQ8N584 583 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 NAT16Q8N8M0 369 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 ANKRD52Q8NB46 1076 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 PDZD8Q8NEN9 1154 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 PJA1Q8NG27 643 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 ENOX1Q8TC92 643 aaKnown RBP9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 CLEC4CQ8WTT0 213 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 EDEM1Q92611 657 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 DNASE1L2Q92874 299 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 FBXO44Q9H4M3 255 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 LMAN1LQ9HAT1 526 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 LTB4R2Q9NPC1 389 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 SIX2Q9NPC8 291 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 PLCB1Q9NQ66 1216 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 HPS4Q9NQG7 708 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 SPATA6Q9NWH7 488 aaPredicted RBP9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 APEX2Q9UBZ4 518 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 SH3BP1Q9Y3L3 701 aa9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 HELZP42694 1942 aaKnown RBP9.5□□□□□ -0.89
GTF3C1-210ENST00000569394 PATJQ8NI35 1801 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 MYOFQ9NZM1 2061 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 ANTXRLA6NF34 631 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 BECN2A8MW95 431 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 ARNTLO00327 626 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 OAS1P00973 400 aaKnown RBP9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 TPM2P07951 284 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 ATP1A3P13637 1013 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 FECHP22830 423 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 GNA15P30679 374 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 HOXC13P31276 330 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 MRE11P49959 708 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 CLCN5P51795 746 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 BCAT1P54687 386 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 MYL5Q02045 173 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 GCNT1Q02742 428 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 PRKCQQ04759 706 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 BST2Q10589 180 aaKnown RBP9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 ITPRIPL2Q3MIP1 535 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 TAF3Q5VWG9 929 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 PMF1Q6P1K2 205 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 RSRC2Q7L4I2 434 aaKnown RBP9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 SCD5Q86SK9 330 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 CCDC105Q8IYK2 499 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 SIX6OS1Q8N1H7 587 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 DTWD2Q8NBA8 298 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 OSCP1Q8WVF1 389 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 ATOH1Q92858 354 aaPredicted RBP9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 ERLEC1Q96DZ1 483 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 CHFRQ96EP1 664 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 PHOX2BQ99453 314 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 KCNH6Q9H252 994 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 KIF9Q9HAQ2 790 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 NLRC4Q9NPP4 1024 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 FAM207AQ9NSI2 230 aaPredicted RBP9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 POLR3BQ9NW08 1133 aaPredicted RBP9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 ARHGAP26Q9UNA1 814 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 SCML2Q9UQR0 700 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 FHOD1Q9Y613 1164 aa9.49□□□□□ -0.89
GTF3C1-210ENST00000569394 COL4A2P08572 1712 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 SHISA7A6NL88 538 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 FOXN3O00409 490 aaPredicted RBP9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 XPO1O14980 1071 aaKnown RBP9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 PMM2O15305 246 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 PAEPP09466 180 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 RALAP11233 206 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 EEF1GP26641 437 aaKnown RBP9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 CTHP32929 405 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 ATP5C1P36542 298 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms