RNA–Protein interactions for RNA: ENST00000569341.1

CFDP1-208, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-208ENST00000569341 AIFM3Q96NN9 605 aa4.59□□□□□ -1.67
CFDP1-208ENST00000569341 MED15Q96RN5 788 aa4.59□□□□□ -1.67
CFDP1-208ENST00000569341 NUP88Q99567 741 aaPredicted RBP4.59□□□□□ -1.67
CFDP1-208ENST00000569341 CPPED1Q9BRF8 314 aaPredicted RBP4.59□□□□□ -1.67
CFDP1-208ENST00000569341 LZTS2Q9BRK4 669 aa4.59□□□□□ -1.67
CFDP1-208ENST00000569341 PDCD2LQ9BRP1 358 aa4.59□□□□□ -1.67
CFDP1-208ENST00000569341 LSM14BQ9BX40 385 aaKnown RBP4.59□□□□□ -1.67
CFDP1-208ENST00000569341 OSBPL6Q9BZF3 934 aa4.59□□□□□ -1.67
CFDP1-208ENST00000569341 EDEM3Q9BZQ6 932 aa4.59□□□□□ -1.67
CFDP1-208ENST00000569341 LRRC27Q9C0I9 530 aa4.59□□□□□ -1.67
CFDP1-208ENST00000569341 MRPL44Q9H9J2 332 aaKnown RBP4.59□□□□□ -1.67
CFDP1-208ENST00000569341 ALG13Q9NP73 1137 aaKnown RBP4.59□□□□□ -1.67
CFDP1-208ENST00000569341 SAMSN1Q9NSI8 373 aaKnown RBP4.59□□□□□ -1.67
CFDP1-208ENST00000569341 ATP8A2Q9NTI2 1148 aa4.59□□□□□ -1.67
CFDP1-208ENST00000569341 GJB4Q9NTQ9 266 aa4.59□□□□□ -1.67
CFDP1-208ENST00000569341 RNF14Q9UBS8 474 aa4.59□□□□□ -1.67
CFDP1-208ENST00000569341 EIF2B4Q9UI10 523 aaKnown RBP4.59□□□□□ -1.67
CFDP1-208ENST00000569341 ASAP1Q9ULH1 1129 aa4.59□□□□□ -1.67
CFDP1-208ENST00000569341 CAPN11Q9UMQ6 739 aa4.59□□□□□ -1.67
CFDP1-208ENST00000569341 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.59□□□□□ -1.67
CFDP1-208ENST00000569341 LUC7L2Q9Y383 392 aaKnown RBP4.59□□□□□ -1.67
CFDP1-208ENST00000569341 PCDHB6Q9Y5E3 794 aa4.59□□□□□ -1.67
CFDP1-208ENST00000569341 SPO11Q9Y5K1 396 aa4.59□□□□□ -1.67
CFDP1-208ENST00000569341 COL18A1P39060 1754 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 ARFGEF2Q9Y6D5 1785 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 COL11A2P13942 1736 aaPredicted RBP4.58□□□□□ -1.68
CFDP1-208ENST00000569341 PAPPAQ13219 1627 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 TNKSO95271 1327 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 VGLL3A8MV65 326 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 EIF3CLB5ME19 914 aaKnown RBP4.58□□□□□ -1.68
CFDP1-208ENST00000569341 KCNJ18B7U540 433 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 NRP1O14786 923 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 POLR3GO15318 223 aaPredicted RBP4.58□□□□□ -1.68
CFDP1-208ENST00000569341 CREB3O43889 395 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 SH3BP5O60239 455 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 USO1O60763 962 aaKnown RBP4.58□□□□□ -1.68
CFDP1-208ENST00000569341 ALDH1A2O94788 518 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 SEC31AO94979 1220 aaKnown RBP4.58□□□□□ -1.68
CFDP1-208ENST00000569341 NDUFA10O95299 355 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 RPN1P04843 607 aaKnown RBP4.58□□□□□ -1.68
CFDP1-208ENST00000569341 GAAP10253 952 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 SCG2P13521 617 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 GYPEP15421 78 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 HMGB2P26583 209 aaKnown RBP4.58□□□□□ -1.68
CFDP1-208ENST00000569341 SMARCA1P28370 1054 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 APOBEC3AP31941 199 aaPredicted RBP4.58□□□□□ -1.68
CFDP1-208ENST00000569341 HNRNPH3P31942 346 aaKnown RBP4.58□□□□□ -1.68
CFDP1-208ENST00000569341 KRT9P35527 623 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 ARHGAP25P42331 645 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 PTH2RP49190 550 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 USP14P54578 494 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 ZBED6P86452 979 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 TROAPQ12815 778 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 FOXI1Q12951 378 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 KCNJ12Q14500 433 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 CASP8Q14790 479 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 KRT31Q15323 416 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 PFKFB3Q16875 520 aaPredicted RBP4.58□□□□□ -1.68
CFDP1-208ENST00000569341 TXNRD1Q16881 649 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 CAVIN4Q5BKX8 364 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 IFIT1BQ5T764 474 aaKnown RBP4.58□□□□□ -1.68
CFDP1-208ENST00000569341 RRAGBQ5VZM2 374 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 FBXO42Q6P3S6 717 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 CCDC62Q6P9F0 684 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 CLEC4GQ6UXB4 293 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 TMTC3Q6ZXV5 915 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 TRAPPC11Q7Z392 1133 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 DGKHQ86XP1 1220 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 ZZZ3Q8IYH5 903 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 ADSSL1Q8N142 457 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 EIF1ADQ8N9N8 165 aaKnown RBP4.58□□□□□ -1.68
CFDP1-208ENST00000569341 C1orf131Q8NDD1 294 aaKnown RBP4.58□□□□□ -1.68
CFDP1-208ENST00000569341 PIK3C3Q8NEB9 887 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 TRIM58Q8NG06 486 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 OR5M3Q8NGP4 307 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 PPP1R14CQ8TAE6 165 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 PPM1EQ8WY54 764 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 LINC00476Q8WZB0 136 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 DRC1Q96MC2 740 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 CAMKK2Q96RR4 588 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 EIF3CQ99613 913 aaKnown RBP4.58□□□□□ -1.68
CFDP1-208ENST00000569341 NDC1Q9BTX1 674 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 CCSER1Q9C0I3 900 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 ARMT1Q9H993 441 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 LZTFL1Q9NQ48 299 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 CCNL1Q9UK58 526 aaPredicted RBP4.58□□□□□ -1.68
CFDP1-208ENST00000569341 KCNJ14Q9UNX9 436 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 CEP83Q9Y592 693 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 SAR1BQ9Y6B6 198 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 COMMD10Q9Y6G5 202 aa4.58□□□□□ -1.68
CFDP1-208ENST00000569341 BCL9O00512 1426 aa4.57□□□□□ -1.68
CFDP1-208ENST00000569341 PVALEFA0A1B0GWK0 134 aa4.57□□□□□ -1.68
CFDP1-208ENST00000569341 ERICH4A6NGS2 130 aa4.57□□□□□ -1.68
CFDP1-208ENST00000569341 SRRM3A6NNA2 597 aaPredicted RBP4.57□□□□□ -1.68
CFDP1-208ENST00000569341 GOLGA8KD6RF30 607 aa4.57□□□□□ -1.68
CFDP1-208ENST00000569341 hCG_1984214I3L0E3 225 aa4.57□□□□□ -1.68
CFDP1-208ENST00000569341 TEX33O43247 280 aa4.57□□□□□ -1.68
CFDP1-208ENST00000569341 KIF1CO43896 1103 aaKnown RBP4.57□□□□□ -1.68
CFDP1-208ENST00000569341 KPNA6O60684 536 aa4.57□□□□□ -1.68
CFDP1-208ENST00000569341 GAS7O60861 476 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms