RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 SNX9Q9Y5X1 595 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 KIF26AQ9ULI4 1882 aaPredicted RBP9.23□□□□□ -0.93
SMG1-216ENST00000569122 ZNF462Q96JM2 2506 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 FAM149AA5PLN7 773 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 PLK4O00444 970 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 SYNCRIPO60506 623 aaKnown RBP9.23□□□□□ -0.93
SMG1-216ENST00000569122 RTN3O95197 1032 aaPredicted RBP9.23□□□□□ -0.93
SMG1-216ENST00000569122 LDHAP00338 332 aaKnown RBP9.23□□□□□ -0.93
SMG1-216ENST00000569122 ACADMP11310 421 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 BDNFP23560 247 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 POLR2BP30876 1174 aaKnown RBP9.23□□□□□ -0.93
SMG1-216ENST00000569122 ACTN2P35609 894 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 WASP42768 502 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 CCT8P50990 548 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 FOSBP53539 338 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 SLC12A3P55017 1021 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 UCNP55089 124 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 TFAMQ00059 246 aaKnown RBP9.23□□□□□ -0.93
SMG1-216ENST00000569122 GTF2BQ00403 316 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 SEMG2Q02383 582 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 GOLGA8FQ08AF8 430 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 GOLGA8DPQ0D2H9 430 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 TAF10Q12962 218 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 ORC1Q13415 861 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 RTP5Q14D33 572 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 HECTD3Q5T447 861 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 DCAF12L1Q5VU92 463 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 DHRS13Q6UX07 377 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 CSGALNACT2Q8N6G5 542 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 NECAB1Q8N987 351 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 UCMAQ8WVF2 138 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 POMGNT1Q8WZA1 660 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 IGSF8Q969P0 613 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 SKA1Q96BD8 255 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 SYT15Q9BQS2 421 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 GPR174Q9BXC1 333 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 IL21RQ9HBE5 538 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 OSGEPQ9NPF4 335 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 USP36Q9P275 1121 aaKnown RBP9.23□□□□□ -0.93
SMG1-216ENST00000569122 FTSJ1Q9UET6 329 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.23□□□□□ -0.93
SMG1-216ENST00000569122 STYXL1Q9Y6J8 313 aa9.23□□□□□ -0.93
SMG1-216ENST00000569122 NTRK1P04629 796 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 ITGB3P05106 788 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 KRT18P05783 430 aaKnown RBP9.22□□□□□ -0.93
SMG1-216ENST00000569122 FAM163BP0C2L3 166 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 YWHAQP27348 245 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 IL12RB1P42701 662 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 TUBP50607 506 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 ZNF131P52739 623 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 ANAPC15P60006 121 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 CYP27A1Q02318 531 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 ME3Q16798 604 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 CCDC157Q569K6 752 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 BROXQ5VW32 411 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 EGFLAMQ63HQ2 1017 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 KCNK18Q7Z418 384 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 MYCBPAPQ8TBZ2 947 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 PRCCQ92733 491 aaPredicted RBP9.22□□□□□ -0.93
SMG1-216ENST00000569122 SIPA1Q96FS4 1042 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 TMEM176AQ96HP8 235 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 NACA2Q9H009 215 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 CD248Q9HCU0 757 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 EXOC7Q9UPT5 735 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 TRIP11Q15643 1979 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 PI4KAP42356 2102 aa9.22□□□□□ -0.93
SMG1-216ENST00000569122 PCDH15Q96QU1 1955 aa9.21□□□□□ -0.93
SMG1-216ENST00000569122 CITO14578 2027 aa9.21□□□□□ -0.93
SMG1-216ENST00000569122 A0A1B0GVT2 93 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 B8ZZF3 427 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 TULP1O00294 542 aaPredicted RBP9.21□□□□□ -0.94
SMG1-216ENST00000569122 PAPSS1O43252 624 aaPredicted RBP9.21□□□□□ -0.94
SMG1-216ENST00000569122 CACNG3O60359 315 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 JAK2O60674 1132 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 DTNBO60941 627 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 TBCAO75347 108 aaKnown RBP9.21□□□□□ -0.94
SMG1-216ENST00000569122 WISP1O95388 367 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 IGLV3-19P01714 112 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 KRT19P08727 400 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 GRIA4P48058 902 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 DGKGP49619 791 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 USP46P62068 366 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 GUCY1B3Q02153 619 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 ILKQ13418 452 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 SOWAHAQ2M3V2 549 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 KIF19Q2TAC6 998 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 SNX30Q5VWJ9 437 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 SLC39A4Q6P5W5 647 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 TMEM25Q86YD3 366 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 MARCH9Q86YJ5 346 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 MIB1Q86YT6 1006 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 CCDC83Q8IWF9 413 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 NUP93Q8N1F7 819 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 CACTIN-AS1Q8N1I8 211 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 C1orf127Q8N9H9 656 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 FBXO18Q8NFZ0 1043 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 FBXO32Q969P5 355 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 MYLPFQ96A32 169 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 HVCN1Q96D96 273 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 MMTAG2Q9BU76 263 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms