RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 HS1BP3Q53T59 392 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 TCEAL5Q5H9L2 206 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 HABP4Q5JVS0 413 aaKnown RBP10.98□□□□□ -0.65
CDH3-210ENST00000569117 SPATA31D4Q6ZUB0 917 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 DENND5BQ6ZUT9 1274 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 H2AFVQ71UI9 128 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 RBM23Q86U06 439 aaKnown RBP10.98□□□□□ -0.65
CDH3-210ENST00000569117 ZDHHC17Q8IUH5 632 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 SIX6OS1Q8N1H7 587 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 EFHBQ8N7U6 833 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 ACRBPQ8NEB7 543 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 VN1R2Q8NFZ6 395 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 TRMT2BQ96GJ1 504 aaKnown RBP10.98□□□□□ -0.65
CDH3-210ENST00000569117 ZNF830Q96NB3 372 aaPredicted RBP10.98□□□□□ -0.65
CDH3-210ENST00000569117 TTLL2Q9BWV7 592 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 SYNCQ9H7C4 482 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 LRRC4Q9HBW1 653 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 CNGB3Q9NQW8 809 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 ST7Q9NRC1 585 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 DZANK1Q9NVP4 752 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 ZDHHC7Q9NXF8 308 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 IL37Q9NZH6 218 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 ADAM22Q9P0K1 906 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 TJP2Q9UDY2 1190 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 INTUQ9ULD6 942 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 MTCH2Q9Y6C9 303 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 USP3Q9Y6I4 520 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.98□□□□□ -0.65
CDH3-210ENST00000569117 TCRBV5S1A1TA0A578 114 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 FAM170AA1A519 330 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 SLC38A8A6NNN8 435 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 PAPSS1O43252 624 aaPredicted RBP10.97□□□□□ -0.65
CDH3-210ENST00000569117 LZTS3O60299 673 aaPredicted RBP10.97□□□□□ -0.65
CDH3-210ENST00000569117 FBXO21O94952 628 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 RTN3O95197 1032 aaPredicted RBP10.97□□□□□ -0.65
CDH3-210ENST00000569117 GLP2RO95838 553 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 LRG1P02750 347 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 HNRNPA1P09651 372 aaKnown RBP eCLIP10.97□□□□□ -0.65
CDH3-210ENST00000569117 CCDC175P0C221 793 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 CSH1P0DML2 217 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 CSH2P0DML3 217 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 SRGAP2BP0DMP2 458 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 CTHP32929 405 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 TKTL1P51854 596 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 VAV2P52735 878 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 GALCP54803 685 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 COL19A1Q14993 1142 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 PTPRNQ16849 979 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 PPM1LQ5SGD2 360 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 CYP4A22Q5TCH4 519 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 SDHAF4Q5VUM1 108 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 OLFML1Q6UWY5 402 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 TMEM184AQ6ZMB5 413 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 FAM183BPQ6ZVS7 135 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 BHLHA9Q7RTU4 235 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 ITIH5Q86UX2 942 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 XYLT1Q86Y38 959 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 DNAAF5Q86Y56 855 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 RNF135Q8IUD6 432 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 ANKMY2Q8IV38 441 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 NUP93Q8N1F7 819 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 TXLNBQ8N3L3 684 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 PHTF2Q8N3S3 785 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 C3orf20Q8ND61 904 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 STKLD1Q8NE28 680 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 CTNNBL1Q8WYA6 563 aaPredicted RBP10.97□□□□□ -0.65
CDH3-210ENST00000569117 IRGQQ8WZA9 623 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 CASP10Q92851 521 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 PSMG2Q969U7 264 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 ZNF653Q96CK0 615 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 C18orf8Q96DM3 657 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 MYRFLQ96LU7 910 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 GAS2L1Q99501 681 aaPredicted RBP10.97□□□□□ -0.65
CDH3-210ENST00000569117 PACSIN1Q9BY11 444 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 ULBP1Q9BZM6 244 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 THAP2Q9H0W7 228 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 FBXO44Q9H4M3 255 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 SFXN1Q9H9B4 322 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 AVENQ9NQS1 362 aaPredicted RBP10.97□□□□□ -0.65
CDH3-210ENST00000569117 COMMD8Q9NX08 183 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 EHD2Q9NZN4 543 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 WDR35Q9P2L0 1181 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 ASB3Q9Y575 518 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 PCDHA13Q9Y5I0 950 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 DENND4AQ7Z401 1863 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 ANAPC1Q9H1A4 1944 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 SZT2Q5T011 3432 aa10.97□□□□□ -0.65
CDH3-210ENST00000569117 PIK3R2O00459 728 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 ZBED1O96006 694 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 CYP1A2P05177 515 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 LCP1P13796 627 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 HMGA1P17096 107 aaKnown RBP10.96□□□□□ -0.65
CDH3-210ENST00000569117 ABCB4P21439 1286 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 RRM1P23921 792 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 GTF2F1P35269 517 aaKnown RBP eCLIP10.96□□□□□ -0.65
CDH3-210ENST00000569117 MAGEA1P43355 309 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 DAOAP59103 153 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 MRPS5P82675 430 aaKnown RBP10.96□□□□□ -0.65
CDH3-210ENST00000569117 RBM10P98175 930 aaKnown RBP10.96□□□□□ -0.65
CDH3-210ENST00000569117 ZNF268Q14587 947 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms