RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-231ENST00000568626 PPP1R9BQ96SB3 815 aa12.61□□□□□ -0.39
FANCA-231ENST00000568626 CDK5RAP1Q96SZ6 601 aaKnown RBP12.61□□□□□ -0.39
FANCA-231ENST00000568626 S1PR5Q9H228 398 aa12.61□□□□□ -0.39
FANCA-231ENST00000568626 IL21Q9HBE4 155 aa12.61□□□□□ -0.39
FANCA-231ENST00000568626 WDR6Q9NNW5 1121 aaKnown RBP12.61□□□□□ -0.39
FANCA-231ENST00000568626 PRDM6Q9NQX0 595 aa12.61□□□□□ -0.39
FANCA-231ENST00000568626 CLIC5Q9NZA1 410 aa12.61□□□□□ -0.39
FANCA-231ENST00000568626 DNMT3BQ9UBC3 853 aaKnown RBP12.61□□□□□ -0.39
FANCA-231ENST00000568626 OBSL1O75147 1896 aa12.61□□□□□ -0.39
FANCA-231ENST00000568626 BRWD1Q9NSI6 2320 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 ANKRD62A6NC57 917 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 SOWAHDA6NJG2 315 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 TMCO5BA8MYB1 307 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 EIF3CLB5ME19 914 aaKnown RBP12.6□□□□□ -0.39
FANCA-231ENST00000568626 HSF2BPO75031 334 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 NDUFA10O95299 355 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 FTLP02792 175 aaPredicted RBP12.6□□□□□ -0.39
FANCA-231ENST00000568626 MYL4P12829 197 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 KCNA5P22460 613 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 SLC6A3Q01959 620 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 ZNF268Q14587 947 aaPredicted RBP12.6□□□□□ -0.39
FANCA-231ENST00000568626 PUS10Q3MIT2 529 aaKnown RBP12.6□□□□□ -0.39
FANCA-231ENST00000568626 ARHGAP15Q53QZ3 475 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 PRSS36Q5K4E3 855 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 SNX30Q5VWJ9 437 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 OR6B2Q6IFH4 312 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 OLFML1Q6UWY5 402 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 FAM183BPQ6ZVS7 135 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 BEND5Q7L4P6 421 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 SLC26A9Q7LBE3 791 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 XYLT1Q86Y38 959 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 SCUBE3Q8IX30 993 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 MCOLN2Q8IZK6 566 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 ZNF276Q8N554 614 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 C3orf20Q8ND61 904 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 PPM1EQ8WY54 764 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 EIF3CQ99613 913 aaKnown RBP12.6□□□□□ -0.39
FANCA-231ENST00000568626 ZNF334Q9HCZ1 680 aaPredicted RBP12.6□□□□□ -0.39
FANCA-231ENST00000568626 HCFC1R1Q9NWW0 138 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 TAS2R14Q9NYV8 317 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 GMIPQ9P107 970 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 INTUQ9ULD6 942 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 FAM50BQ9Y247 325 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 MRPS23Q9Y3D9 190 aaKnown RBP12.6□□□□□ -0.39
FANCA-231ENST00000568626 EPN1Q9Y6I3 576 aaPredicted RBP12.6□□□□□ -0.39
FANCA-231ENST00000568626 SCINQ9Y6U3 715 aa12.6□□□□□ -0.39
FANCA-231ENST00000568626 ZNF840PA6NDX5 716 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 PIK3R2O00459 728 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 TADA3O75528 432 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 GABBR2O75899 941 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 F11P03951 625 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 H2AFZP0C0S5 128 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 RALAP11233 206 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 FSHRP23945 695 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 YWHAGP61981 247 aaKnown RBP eCLIP12.59□□□□□ -0.39
FANCA-231ENST00000568626 KRT83P78385 493 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 PTP4A2Q12974 167 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 CBX2Q14781 532 aaPredicted RBP12.59□□□□□ -0.39
FANCA-231ENST00000568626 LEXMQ3ZCV2 418 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 FAM102AQ5T9C2 384 aaPredicted RBP12.59□□□□□ -0.39
FANCA-231ENST00000568626 DNAJC24Q6P3W2 148 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 H2AFVQ71UI9 128 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 ARCQ7LC44 396 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 BHLHA9Q7RTU4 235 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 HS6ST3Q8IZP7 471 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 SHKBP1Q8TBC3 707 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 CTNNBL1Q8WYA6 563 aaPredicted RBP12.59□□□□□ -0.39
FANCA-231ENST00000568626 SUSD6Q92537 303 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 FAM149B1Q96BN6 582 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 ZNF653Q96CK0 615 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 MCRS1Q96EZ8 462 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 APOL5Q9BWW9 433 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 ATXN3LQ9H3M9 355 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 POPDC2Q9HBU9 364 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 MRPL47Q9HD33 250 aaKnown RBP12.59□□□□□ -0.39
FANCA-231ENST00000568626 ABCC13Q9NSE7 274 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 SPTLC3Q9NUV7 552 aa12.59□□□□□ -0.39
FANCA-231ENST00000568626 ZFP37Q9Y6Q3 630 aaPredicted RBP12.59□□□□□ -0.39
FANCA-231ENST00000568626 DENND4CQ5VZ89 1909 aa12.58□□□□□ -0.39
FANCA-231ENST00000568626 A0A1W2PRU2 124 aa12.58□□□□□ -0.4
FANCA-231ENST00000568626 YJEFN3A6XGL0 299 aa12.58□□□□□ -0.4
FANCA-231ENST00000568626 E7ENQ6 273 aa12.58□□□□□ -0.4
FANCA-231ENST00000568626 H3BQ06 376 aaPredicted RBP12.58□□□□□ -0.4
FANCA-231ENST00000568626 DAB1O75553 588 aa12.58□□□□□ -0.4
FANCA-231ENST00000568626 LTFP02788 710 aa12.58□□□□□ -0.4
FANCA-231ENST00000568626 TMEM253P0C7T8 217 aa12.58□□□□□ -0.4
FANCA-231ENST00000568626 RRM1P23921 792 aa12.58□□□□□ -0.4
FANCA-231ENST00000568626 YWHAZP63104 245 aaKnown RBP12.58□□□□□ -0.4
FANCA-231ENST00000568626 CCZ1BP86790 482 aa12.58□□□□□ -0.4
FANCA-231ENST00000568626 CCZ1P86791 482 aaPredicted RBP12.58□□□□□ -0.4
FANCA-231ENST00000568626 AAK1Q2M2I8 961 aa12.58□□□□□ -0.4
FANCA-231ENST00000568626 HECTD3Q5T447 861 aa12.58□□□□□ -0.4
FANCA-231ENST00000568626 BTBD8Q5XKL5 378 aa12.58□□□□□ -0.4
FANCA-231ENST00000568626 KLHDC10Q6PID8 442 aa12.58□□□□□ -0.4
FANCA-231ENST00000568626 RAD9BQ6WBX8 426 aa12.58□□□□□ -0.4
FANCA-231ENST00000568626 GAREM2Q75VX8 874 aa12.58□□□□□ -0.4
FANCA-231ENST00000568626 TMEM150AQ86TG1 271 aa12.58□□□□□ -0.4
FANCA-231ENST00000568626 CLEC4CQ8WTT0 213 aa12.58□□□□□ -0.4
FANCA-231ENST00000568626 OLA1Q9NTK5 396 aaKnown RBP12.58□□□□□ -0.4
FANCA-231ENST00000568626 PARVAQ9NVD7 372 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms