RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 C11orf70Q9BRQ4 267 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 PACSIN1Q9BY11 444 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 ULBP1Q9BZM6 244 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 MIS12Q9H081 205 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 FBXO44Q9H4M3 255 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 SYNCQ9H7C4 482 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 SFXN1Q9H9B4 322 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 CNGB3Q9NQW8 809 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 ADAM22Q9P0K1 906 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 XIRP2A4UGR9 3374 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 CCDC195A0A1B0GUA6 201 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 TCRBV5S1A1TA0A578 114 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 ANKRD62A6NC57 917 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 NCK2O43639 380 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 XYLBO75191 536 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 TBX10O75333 385 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 FBXO21O94952 628 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 IPO7O95373 1038 aaKnown RBP8.88□□□□□ -0.99
SF3B3-212ENST00000568539 ZBED1O96006 694 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 H2AFZP0C0S5 128 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 USP17L7P0C7H9 530 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 TMEM253P0C7T8 217 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 SRGAP2BP0DMP2 458 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 MYBL1P10243 752 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 ABCB4P21439 1286 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 RRM1P23921 792 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 YWHAQP27348 245 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 SCNN1AP37088 669 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 MAGEA1P43355 309 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 DAOAP59103 153 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 KRT83P78385 493 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 MRPS5P82675 430 aaKnown RBP8.88□□□□□ -0.99
SF3B3-212ENST00000568539 IFRD2Q12894 506 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-212ENST00000568539 ZNF268Q14587 947 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-212ENST00000568539 ANKRD54Q6NXT1 300 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 SYCE2Q6PIF2 218 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 FAM183BPQ6ZVS7 135 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 H2AFVQ71UI9 128 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 TMC8Q8IU68 726 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 ELMOD1Q8N336 334 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 MICALL1Q8N3F8 863 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 C12orf76Q8N812 135 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-212ENST00000568539 FEZF2Q8TBJ5 459 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 IRGQQ8WZA9 623 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 NDRG1Q92597 394 aaKnown RBP8.88□□□□□ -0.99
SF3B3-212ENST00000568539 ZNF653Q96CK0 615 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 PABPC5Q96DU9 382 aaKnown RBP8.88□□□□□ -0.99
SF3B3-212ENST00000568539 FAM122AQ96E09 287 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 TRIM11Q96F44 468 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 PIWIL1Q96J94 861 aaKnown RBP8.88□□□□□ -0.99
SF3B3-212ENST00000568539 ZNF512Q96ME7 567 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-212ENST00000568539 DESI2Q9BSY9 194 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 LRRC3Q9BY71 257 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 PRKD2Q9BZL6 878 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 THAP2Q9H0W7 228 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 IL21Q9HBE4 155 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 ZNF334Q9HCZ1 680 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-212ENST00000568539 HCFC1R1Q9NWW0 138 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 EHD2Q9NZN4 543 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 CLEC1BQ9P126 229 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 WDR35Q9P2L0 1181 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 DNMT3BQ9UBC3 853 aaKnown RBP8.88□□□□□ -0.99
SF3B3-212ENST00000568539 INTUQ9ULD6 942 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 STRIP2Q9ULQ0 834 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 MAGED2Q9UNF1 606 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-212ENST00000568539 SCML2Q9UQR0 700 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 PCDHA13Q9Y5I0 950 aa8.88□□□□□ -0.99
SF3B3-212ENST00000568539 TRANK1O15050 2925 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 REV3LO60673 3130 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 RCCD1A6NED2 376 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 YJEFN3A6XGL0 299 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 E7ENQ6 273 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 C3orf80F5H4A9 247 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 GOLGA8SH3BPF8 625 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 SART1O43290 800 aaKnown RBP8.87□□□□□ -0.99
SF3B3-212ENST00000568539 CYP1A2P05177 515 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 ZDHHC11BP0C7U3 371 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 FOSL2P15408 326 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 HOXB8P17481 243 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-212ENST00000568539 LTBRP36941 435 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 PGFP49763 221 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 VAV2P52735 878 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 EPHA5P54756 1037 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 GPC5P78333 572 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 SLC6A3Q01959 620 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 DLX2Q07687 328 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-212ENST00000568539 TAF10Q12962 218 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 SKIV2LQ15477 1246 aaKnown RBP8.87□□□□□ -0.99
SF3B3-212ENST00000568539 TAF5Q15542 800 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 TAF12Q16514 161 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 OR6B2Q6IFH4 312 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 PLEKHA7Q6IQ23 1121 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 TMC5Q6UXY8 1006 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 SLC26A9Q7LBE3 791 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 SCD5Q86SK9 330 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 PHLDB2Q86SQ0 1253 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 TMEM150AQ86TG1 271 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 MON1AQ86VX9 555 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 C3orf20Q8ND61 904 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 PDZD8Q8NEN9 1154 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms