RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 P2RY2P41231 377 aa15.96■□□□□ 0.15
COMMD4-223ENST00000568301 CDH8P55286 799 aa15.96■□□□□ 0.15
COMMD4-223ENST00000568301 GAD2Q05329 585 aa15.96■□□□□ 0.15
COMMD4-223ENST00000568301 MESP2Q0VG99 397 aa15.96■□□□□ 0.15
COMMD4-223ENST00000568301 IFRD2Q12894 506 aaPredicted RBP15.96■□□□□ 0.15
COMMD4-223ENST00000568301 PREPLQ4J6C6 727 aaPredicted RBP15.96■□□□□ 0.15
COMMD4-223ENST00000568301 ZNF667Q5HYK9 610 aa15.96■□□□□ 0.15
COMMD4-223ENST00000568301 SPDYCQ5MJ68 293 aa15.96■□□□□ 0.15
COMMD4-223ENST00000568301 LY6G5CQ5SRR4 150 aa15.96■□□□□ 0.15
COMMD4-223ENST00000568301 PAQR9Q6ZVX9 377 aa15.96■□□□□ 0.15
COMMD4-223ENST00000568301 FRMD1Q8N878 549 aa15.96■□□□□ 0.15
COMMD4-223ENST00000568301 PARD3BQ8TEW8 1205 aa15.96■□□□□ 0.15
COMMD4-223ENST00000568301 WHAMMQ8TF30 809 aa15.96■□□□□ 0.15
COMMD4-223ENST00000568301 TMEM174Q8WUU8 243 aa15.96■□□□□ 0.15
COMMD4-223ENST00000568301 ZFRQ96KR1 1074 aaKnown RBP15.96■□□□□ 0.15
COMMD4-223ENST00000568301 BLZF1Q9H2G9 400 aa15.96■□□□□ 0.15
COMMD4-223ENST00000568301 POLMQ9NP87 494 aaPredicted RBP15.96■□□□□ 0.15
COMMD4-223ENST00000568301 SLC39A2Q9NP94 309 aa15.96■□□□□ 0.15
COMMD4-223ENST00000568301 TNRC6BQ9UPQ9 1833 aaKnown RBP15.96■□□□□ 0.14
COMMD4-223ENST00000568301 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 SRRM3A6NNA2 597 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-223ENST00000568301 SGK1O00141 431 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 SCAMP3O14828 347 aaKnown RBP15.95■□□□□ 0.14
COMMD4-223ENST00000568301 KLF8O95600 359 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-223ENST00000568301 C4BPAP04003 597 aaKnown RBP15.95■□□□□ 0.14
COMMD4-223ENST00000568301 ZDHHC11BP0C7U3 371 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 CASP1P29466 404 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 TIE1P35590 1138 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 BIRC3Q13489 604 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 NCOA4Q13772 614 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 BYSLQ13895 437 aaKnown RBP15.95■□□□□ 0.14
COMMD4-223ENST00000568301 ZNF699Q32M78 642 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 TRIM61Q5EBN2 209 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 EMC10Q5UCC4 262 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 KIAA1211LQ6NV74 962 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 NUDT18Q6ZVK8 323 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 LPCAT2Q7L5N7 544 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 FAM35AQ86V20 835 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 C12orf40Q86WS4 652 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 TMEFF1Q8IYR6 380 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 PHTF2Q8N3S3 785 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 SCAMP5Q8TAC9 235 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 SMARCD1Q96GM5 515 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 SMYD3Q9H7B4 428 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 DMAP1Q9NPF5 467 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-223ENST00000568301 TMEM74BQ9NUR3 256 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 FAM13BQ9NYF5 915 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 EVLQ9UI08 416 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-223ENST00000568301 CIZ1Q9ULV3 898 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-223ENST00000568301 SH3BP1Q9Y3L3 701 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 ANKRD11Q6UB99 2663 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-223ENST00000568301 CACNA1EQ15878 2313 aa15.95■□□□□ 0.14
COMMD4-223ENST00000568301 CEP192Q8TEP8 1941 aa15.94■□□□□ 0.14
COMMD4-223ENST00000568301 TMEM8BA6NDV4 472 aa15.94■□□□□ 0.14
COMMD4-223ENST00000568301 HOXC11O43248 304 aaPredicted RBP15.94■□□□□ 0.14
COMMD4-223ENST00000568301 MAP3K13O43283 966 aa15.94■□□□□ 0.14
COMMD4-223ENST00000568301 ADAM23O75077 832 aa15.94■□□□□ 0.14
COMMD4-223ENST00000568301 PTGER3P43115 390 aa15.94■□□□□ 0.14
COMMD4-223ENST00000568301 MAPK8P45983 427 aa15.94■□□□□ 0.14
COMMD4-223ENST00000568301 CASP4P49662 377 aa15.94■□□□□ 0.14
COMMD4-223ENST00000568301 CUL4BQ13620 913 aa15.94■□□□□ 0.14
COMMD4-223ENST00000568301 SGSM1Q2NKQ1 1148 aa15.94■□□□□ 0.14
COMMD4-223ENST00000568301 BTBD8Q5XKL5 378 aa15.94■□□□□ 0.14
COMMD4-223ENST00000568301 ARMCX6Q7L4S7 300 aa15.94■□□□□ 0.14
COMMD4-223ENST00000568301 SLC9A9Q8IVB4 645 aa15.94■□□□□ 0.14
COMMD4-223ENST00000568301 ETFBKMTQ8IXQ9 262 aa15.94■□□□□ 0.14
COMMD4-223ENST00000568301 FUKQ8N0W3 1084 aa15.94■□□□□ 0.14
COMMD4-223ENST00000568301 CRYBG2Q8N1P7 616 aa15.94■□□□□ 0.14
COMMD4-223ENST00000568301 PLEKHO2Q8TD55 490 aa15.94■□□□□ 0.14
COMMD4-223ENST00000568301 SPACA7Q96KW9 195 aa15.94■□□□□ 0.14
COMMD4-223ENST00000568301 MED10Q9BTT4 135 aa15.94■□□□□ 0.14
COMMD4-223ENST00000568301 DMAC2Q9NW81 257 aa15.94■□□□□ 0.14
COMMD4-223ENST00000568301 DEC1Q9P2X7 70 aa15.94■□□□□ 0.14
COMMD4-223ENST00000568301 MBD1Q9UIS9 605 aaPredicted RBP15.94■□□□□ 0.14
COMMD4-223ENST00000568301 TBC1D3BA6NDS4 549 aa15.93■□□□□ 0.14
COMMD4-223ENST00000568301 LRRIQ3A6PVS8 624 aaPredicted RBP15.93■□□□□ 0.14
COMMD4-223ENST00000568301 HYAL3O43820 417 aaPredicted RBP15.93■□□□□ 0.14
COMMD4-223ENST00000568301 RPN1P04843 607 aaKnown RBP15.93■□□□□ 0.14
COMMD4-223ENST00000568301 P4HA1P13674 534 aa15.93■□□□□ 0.14
COMMD4-223ENST00000568301 DPP6P42658 865 aa15.93■□□□□ 0.14
COMMD4-223ENST00000568301 AFMP43652 599 aa15.93■□□□□ 0.14
COMMD4-223ENST00000568301 SLC5A3P53794 718 aa15.93■□□□□ 0.14
COMMD4-223ENST00000568301 LMAN2Q12907 356 aa15.93■□□□□ 0.14
COMMD4-223ENST00000568301 MAP7D1Q3KQU3 841 aa15.93■□□□□ 0.14
COMMD4-223ENST00000568301 RESP18Q5W5W9 173 aa15.93■□□□□ 0.14
COMMD4-223ENST00000568301 ATL3Q6DD88 541 aa15.93■□□□□ 0.14
COMMD4-223ENST00000568301 TRMT11Q7Z4G4 463 aaKnown RBP15.93■□□□□ 0.14
COMMD4-223ENST00000568301 SYT12Q8IV01 421 aa15.93■□□□□ 0.14
COMMD4-223ENST00000568301 NUSAP1Q9BXS6 441 aaKnown RBP15.93■□□□□ 0.14
COMMD4-223ENST00000568301 FBXO44Q9H4M3 255 aa15.93■□□□□ 0.14
COMMD4-223ENST00000568301 CCSER2Q9H7U1 834 aa15.93■□□□□ 0.14
COMMD4-223ENST00000568301 CSNK1G1Q9HCP0 422 aa15.93■□□□□ 0.14
COMMD4-223ENST00000568301 ZDHHC4Q9NPG8 344 aa15.93■□□□□ 0.14
COMMD4-223ENST00000568301 SPHK2Q9NRA0 654 aa15.93■□□□□ 0.14
COMMD4-223ENST00000568301 BCCIPQ9P287 314 aaKnown RBP eCLIP15.93■□□□□ 0.14
COMMD4-223ENST00000568301 PCDHA7Q9UN72 937 aa15.93■□□□□ 0.14
COMMD4-223ENST00000568301 SMG1Q96Q15 3661 aaKnown RBP15.93■□□□□ 0.14
COMMD4-223ENST00000568301 ADAMTS9Q9P2N4 1935 aa15.92■□□□□ 0.14
COMMD4-223ENST00000568301 FASNP49327 2511 aaKnown RBP15.92■□□□□ 0.14
COMMD4-223ENST00000568301 TULP3O75386 442 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms