RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 TNS4Q8IZW8 715 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 ANKLE1Q8NAG6 615 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 NETO2Q8NC67 525 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 RNF169Q8NCN4 708 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 ATP6V0A1Q93050 837 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 ZBTB45Q96K62 511 aaPredicted RBP11.29□□□□□ -0.6
PALB2-206ENST00000568219 GPR88Q9GZN0 384 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 POLR3FQ9H1D9 316 aaPredicted RBP11.29□□□□□ -0.6
PALB2-206ENST00000568219 THAP1Q9NVV9 213 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 ASB3Q9Y575 518 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 TTLL13PA6NNM8 815 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 H3BSA7 217 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 M0QYV0 167 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 SORBS2O94875 1100 aaKnown RBP11.29□□□□□ -0.6
PALB2-206ENST00000568219 RALBP11234 206 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 IVDP26440 423 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 MMRN1Q13201 1228 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 DPYSL3Q14195 570 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 HABP4Q5JVS0 413 aaKnown RBP11.29□□□□□ -0.6
PALB2-206ENST00000568219 MFSD4BQ5TF39 518 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 POTEAQ6S8J7 498 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 PATL1Q86TB9 770 aaKnown RBP11.29□□□□□ -0.6
PALB2-206ENST00000568219 C12orf50Q8NA57 414 aaPredicted RBP11.29□□□□□ -0.6
PALB2-206ENST00000568219 ADAM32Q8TC27 787 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 UPF3AQ9H1J1 476 aaKnown RBP11.29□□□□□ -0.6
PALB2-206ENST00000568219 C1orf232A0A0U1RR37 186 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 TRMUO75648 421 aaKnown RBP11.29□□□□□ -0.6
PALB2-206ENST00000568219 EIF2B2P49770 351 aaKnown RBP11.29□□□□□ -0.6
PALB2-206ENST00000568219 RHBDF2Q6PJF5 856 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 FAM156AQ8NDB6 213 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 CNKSR2Q8WXI2 1034 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 EXT2Q93063 718 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 MPHOSPH6Q99547 160 aaKnown RBP11.29□□□□□ -0.6
PALB2-206ENST00000568219 SSX2IPQ9Y2D8 614 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 LRRC37A3O60309 1634 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.28□□□□□ -0.6
PALB2-206ENST00000568219 ABCD1P33897 745 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 FDFT1P37268 417 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 GPX6P59796 221 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 CYP24A1Q07973 514 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 SIX1Q15475 284 aaPredicted RBP11.28□□□□□ -0.6
PALB2-206ENST00000568219 JADE1Q6IE81 842 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 DPY19L2Q6NUT2 758 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 PAOXQ6QHF9 649 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 PCDH20Q8N6Y1 951 aaKnown RBP11.28□□□□□ -0.6
PALB2-206ENST00000568219 BANPQ8N9N5 519 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 BHLHE22Q8NFJ8 381 aaPredicted RBP11.28□□□□□ -0.6
PALB2-206ENST00000568219 CPT1BQ92523 772 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 GATA6Q92908 595 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 ATF5Q9Y2D1 282 aaPredicted RBP11.28□□□□□ -0.6
PALB2-206ENST00000568219 PCDHAC2Q9Y5I4 1007 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 NRXN3Q9Y4C0 1643 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 SAC3D1A6NKF1 404 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 UGT1A9O60656 530 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 CYP3A4P08684 503 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 MYBPC3Q14896 1274 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 FOXB2Q5VYV0 432 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 PPP1R2P3Q6NXS1 205 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 GPR141Q7Z602 305 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 TSPAN14Q8NG11 270 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 DCUN1D1Q96GG9 259 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 ING2Q9H160 280 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 UGT1A7Q9HAW7 530 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 UGT1A10Q9HAW8 530 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 UGT1A8Q9HAW9 530 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 SELENONQ9NZV5 590 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 WRAP73Q9P2S5 460 aaPredicted RBP11.28□□□□□ -0.6
PALB2-206ENST00000568219 POLLQ9UGP5 575 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 VAV3Q9UKW4 847 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 GNEQ9Y223 722 aaKnown RBP11.28□□□□□ -0.6
PALB2-206ENST00000568219 F8W8V4 182 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 MAGEC1O60732 1142 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 CRCPO75575 148 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 ASLP04424 464 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 FGFR1P11362 822 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 MUTP22033 750 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 TSPY1Q01534 308 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 HEATR6Q6AI08 1181 aaKnown RBP11.28□□□□□ -0.6
PALB2-206ENST00000568219 KLHDC10Q6PID8 442 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 BNC2Q6ZN30 1099 aaPredicted RBP11.28□□□□□ -0.6
PALB2-206ENST00000568219 DENND1AQ8TEH3 1009 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 DDI1Q8WTU0 396 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 CYP26B1Q9NR63 512 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 ASNSD1Q9NWL6 643 aa11.28□□□□□ -0.6
PALB2-206ENST00000568219 TFPTP0C1Z6 253 aa11.27□□□□□ -0.6
PALB2-206ENST00000568219 OCM2P0CE71 109 aa11.27□□□□□ -0.6
PALB2-206ENST00000568219 OCMP0CE72 109 aaPredicted RBP11.27□□□□□ -0.6
PALB2-206ENST00000568219 NME5P56597 212 aa11.27□□□□□ -0.6
PALB2-206ENST00000568219 NLRP11P59045 1033 aaKnown RBP11.27□□□□□ -0.6
PALB2-206ENST00000568219 SLC12A1Q13621 1099 aa11.27□□□□□ -0.6
PALB2-206ENST00000568219 KRT72Q14CN4 511 aa11.27□□□□□ -0.6
PALB2-206ENST00000568219 NEDD8Q15843 81 aa11.27□□□□□ -0.6
PALB2-206ENST00000568219 EFHC2Q5JST6 749 aa11.27□□□□□ -0.6
PALB2-206ENST00000568219 TMEM63BQ5T3F8 832 aa11.27□□□□□ -0.6
PALB2-206ENST00000568219 RNASEH2BQ5TBB1 312 aaKnown RBP11.27□□□□□ -0.6
PALB2-206ENST00000568219 KDELC2Q7Z4H8 507 aa11.27□□□□□ -0.6
PALB2-206ENST00000568219 ANKS1BQ7Z6G8 1248 aa11.27□□□□□ -0.6
PALB2-206ENST00000568219 RYBPQ8N488 228 aaPredicted RBP11.27□□□□□ -0.6
PALB2-206ENST00000568219 HELQQ8TDG4 1101 aa11.27□□□□□ -0.6
PALB2-206ENST00000568219 JADE3Q92613 823 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms