RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 RNF10Q8N5U6 811 aaKnown RBP6.58□□□□□ -1.36
CAPN3-218ENST00000568153 PCSK9Q8NBP7 692 aaKnown RBP6.58□□□□□ -1.36
CAPN3-218ENST00000568153 RAET1EQ8TD07 263 aa6.58□□□□□ -1.36
CAPN3-218ENST00000568153 TAS1R2Q8TE23 839 aa6.58□□□□□ -1.36
CAPN3-218ENST00000568153 DNAJB3Q8WWF6 145 aa6.58□□□□□ -1.36
CAPN3-218ENST00000568153 SREK1Q8WXA9 508 aaKnown RBP6.58□□□□□ -1.36
CAPN3-218ENST00000568153 TRIB2Q92519 343 aa6.58□□□□□ -1.36
CAPN3-218ENST00000568153 DHX38Q92620 1227 aaKnown RBP6.58□□□□□ -1.36
CAPN3-218ENST00000568153 JAKMIP2Q96AA8 810 aa6.58□□□□□ -1.36
CAPN3-218ENST00000568153 ERO1AQ96HE7 468 aa6.58□□□□□ -1.36
CAPN3-218ENST00000568153 ADPGKQ9BRR6 497 aa6.58□□□□□ -1.36
CAPN3-218ENST00000568153 TUBB2BQ9BVA1 445 aa6.58□□□□□ -1.36
CAPN3-218ENST00000568153 KRTAP9-2Q9BYQ4 174 aa6.58□□□□□ -1.36
CAPN3-218ENST00000568153 IFIH1Q9BYX4 1025 aaKnown RBP6.58□□□□□ -1.36
CAPN3-218ENST00000568153 FAM49AQ9H0Q0 323 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-218ENST00000568153 TOPORSQ9NS56 1045 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-218ENST00000568153 MBNL3Q9NUK0 354 aaKnown RBP6.58□□□□□ -1.36
CAPN3-218ENST00000568153 GFOD1Q9NXC2 390 aa6.58□□□□□ -1.36
CAPN3-218ENST00000568153 HDAC6Q9UBN7 1215 aa6.58□□□□□ -1.36
CAPN3-218ENST00000568153 REXO2Q9Y3B8 237 aaKnown RBP6.58□□□□□ -1.36
CAPN3-218ENST00000568153 ZNF451Q9Y4E5 1061 aa6.58□□□□□ -1.36
CAPN3-218ENST00000568153 A0A087X0T9 212 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 A0A0U1RQJ8 604 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 CTAGE9A4FU28 777 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 LACTBL1A8MY62 500 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 B2RBV5 119 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 F8VZ95 297 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 ZNF263O14978 683 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 PJA2O43164 708 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 SIGLEC6O43699 453 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 FAM189A1O60320 539 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 B4GALT4O60513 344 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 FKTNO75072 461 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 TACC1O75410 805 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 URI1O94763 535 aaPredicted RBP6.57□□□□□ -1.36
CAPN3-218ENST00000568153 TNNC2P02585 160 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 HMGCRP04035 888 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 RPLP2P05387 115 aaKnown RBP6.57□□□□□ -1.36
CAPN3-218ENST00000568153 FAM228BP0C875 321 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 DARSP14868 501 aaKnown RBP6.57□□□□□ -1.36
CAPN3-218ENST00000568153 ARF4P18085 180 aaPredicted RBP6.57□□□□□ -1.36
CAPN3-218ENST00000568153 CD247P20963 164 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 CCND3P30281 292 aaPredicted RBP6.57□□□□□ -1.36
CAPN3-218ENST00000568153 TNFSF9P41273 254 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 NAP1L1P55209 391 aaKnown RBP6.57□□□□□ -1.36
CAPN3-218ENST00000568153 PRMT2P55345 433 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 BPIFB4P59827 614 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 OSTNP61366 133 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 ZNF200P98182 395 aaPredicted RBP6.57□□□□□ -1.36
CAPN3-218ENST00000568153 ZP2Q05996 745 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 TRPC3Q13507 836 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 BMS1Q14692 1282 aaKnown RBP6.57□□□□□ -1.36
CAPN3-218ENST00000568153 KCNA10Q16322 511 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 ZBTB41Q5SVQ8 909 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 EEF1DP3Q658K8 133 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 LMBRD2Q68DH5 695 aaPredicted RBP6.57□□□□□ -1.36
CAPN3-218ENST00000568153 TAF2Q6P1X5 1199 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 ALKBH5Q6P6C2 394 aaKnown RBP6.57□□□□□ -1.36
CAPN3-218ENST00000568153 C6orf15Q6UXA7 325 aaPredicted RBP6.57□□□□□ -1.36
CAPN3-218ENST00000568153 CXCL17Q6UXB2 119 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 CATSPER4Q7RTX7 472 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 TMPRSS7Q7RTY8 843 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 TRAPPC11Q7Z392 1133 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 RSPH3Q86UC2 560 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 ARHGEF19Q8IW93 802 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 BRSK2Q8IWQ3 736 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 CD302Q8IX05 232 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 FAM71AQ8IYT1 594 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 CELF2-AS1Q8N7Q2 184 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 KLHDC9Q8NEP7 349 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 SLC30A5Q8TAD4 765 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 CD99L2Q8TCZ2 262 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 ATRIPQ8WXE1 791 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 ANKRD36BP1Q96IX9 119 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 CPB2Q96IY4 423 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 ACAP3Q96P50 834 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 PPP1R16BQ96T49 567 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 AGPAT1Q99943 283 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 CDT1Q9H211 546 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 PDZD7Q9H5P4 517 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 ASB7Q9H672 318 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 CARS2Q9HA77 564 aaKnown RBP6.57□□□□□ -1.36
CAPN3-218ENST00000568153 PLEKHA5Q9HAU0 1116 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 GP6Q9HCN6 339 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 XPNPEP3Q9NQH7 507 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 PRDM7Q9NQW5 492 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 DUSP13Q9UII6 198 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 AJAP1Q9UKB5 411 aaPredicted RBP6.57□□□□□ -1.36
CAPN3-218ENST00000568153 GINS2Q9Y248 185 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 DUSP10Q9Y6W6 482 aa6.57□□□□□ -1.36
CAPN3-218ENST00000568153 RBBP6Q7Z6E9 1792 aaKnown RBP6.57□□□□□ -1.36
CAPN3-218ENST00000568153 MYADML2A6NDP7 307 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-218ENST00000568153 M0QZ92 97 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 TSPAN1O60635 241 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 CABYRO75952 493 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 SGPL1O95470 568 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 VNN1O95497 513 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 EPHX1P07099 455 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 ASGR1P07306 291 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms