RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 CLSTN1O94985 981 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 PAEPP09466 180 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 TRIM49P0CI25 452 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 TRIM49CP0CI26 452 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 MBL2P11226 248 aaPredicted RBP11.81□□□□□ -0.52
CDH3-206ENST00000567674 TNFRSF4P43489 277 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 PLA2G4AP47712 749 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 CACNA2D1P54289 1103 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 MAP3K7CLP57077 242 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 COG7P83436 770 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 GCNT1Q02742 428 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 GAD2Q05329 585 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 GAS6Q14393 721 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 ACAP1Q15027 740 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 CCDC142Q17RM4 750 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 RAB41Q5JT25 222 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 PM20D1Q6GTS8 502 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 LAIR1Q6GTX8 287 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 FSTL4Q6MZW2 842 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 TTI2Q6NXR4 508 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 SCARA5Q6ZMJ2 495 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 SMG9Q9H0W8 520 aaKnown RBP11.81□□□□□ -0.52
CDH3-206ENST00000567674 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.81□□□□□ -0.52
CDH3-206ENST00000567674 MAN1B1Q9UKM7 699 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 ACACBO00763 2458 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 OTOL1A6NHN0 477 aaPredicted RBP11.8□□□□□ -0.52
CDH3-206ENST00000567674 PRR5-ARHGAP8B1AHC4 643 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 PPP1R3GB7ZBB8 358 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 HOXC11O43248 304 aaPredicted RBP11.8□□□□□ -0.52
CDH3-206ENST00000567674 COCHO43405 550 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 TLR5O60602 858 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 ADRB1P08588 477 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 CCDC192P0DO97 292 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 RALAP11233 206 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 VDRP11473 427 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 RAP1GAPP47736 663 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 SOX9P48436 509 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 FMO5P49326 533 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 ATXN1P54253 815 aaKnown RBP11.8□□□□□ -0.52
CDH3-206ENST00000567674 ZNF445P59923 1031 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 ARHGAP8P85298 464 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 ZXDBP98169 803 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 CUL2Q13617 745 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 DHCR24Q15392 516 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 TCERG1LQ5VWI1 586 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 BTBD8Q5XKL5 378 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 SPOPLQ6IQ16 392 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 ENOSF1Q7L5Y1 443 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 TRMT11Q7Z4G4 463 aaKnown RBP11.8□□□□□ -0.52
CDH3-206ENST00000567674 SMYD4Q8IYR2 804 aaPredicted RBP11.8□□□□□ -0.52
CDH3-206ENST00000567674 DCLK2Q8N568 766 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 C12orf29Q8N999 325 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 SLC4A11Q8NBS3 891 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 SCAMP5Q8TAC9 235 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 KCTD13Q8WZ19 329 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 SEMA4DQ92854 862 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 CHFRQ96EP1 664 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 ZFRQ96KR1 1074 aaKnown RBP11.8□□□□□ -0.52
CDH3-206ENST00000567674 HEXIM2Q96MH2 286 aaKnown RBP11.8□□□□□ -0.52
CDH3-206ENST00000567674 DCLK3Q9C098 648 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 OLA1Q9NTK5 396 aaKnown RBP11.8□□□□□ -0.52
CDH3-206ENST00000567674 MARK1Q9P0L2 795 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 KIAA1468Q9P260 1216 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 WDR35Q9P2L0 1181 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 CHORDC1Q9UHD1 332 aaPredicted RBP11.8□□□□□ -0.52
CDH3-206ENST00000567674 DNMT3LQ9UJW3 386 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 SLC8A2Q9UPR5 921 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 SH3BP1Q9Y3L3 701 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 ATRXP46100 2492 aa11.8□□□□□ -0.52
CDH3-206ENST00000567674 ZNF638Q14966 1978 aaKnown RBP11.79□□□□□ -0.52
CDH3-206ENST00000567674 XPO1O14980 1071 aaKnown RBP11.79□□□□□ -0.52
CDH3-206ENST00000567674 NPC1O15118 1278 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 BEST1O76090 585 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 ABL1P00519 1130 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 RETP07949 1114 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 SETSIPP0DME0 302 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 CCDC130P13994 396 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 ARSAP15289 507 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 CHKAP35790 457 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 GRIA2P42262 883 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 ZNF132P52740 706 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 PMS1P54277 932 aaKnown RBP11.79□□□□□ -0.52
CDH3-206ENST00000567674 BCAT1P54687 386 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 RAD23BP54727 409 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 SATB1Q01826 763 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 PAK1Q13153 545 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 CBWD6Q4V339 395 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 DCAF17Q5H9S7 520 aaPredicted RBP11.79□□□□□ -0.52
CDH3-206ENST00000567674 CBWD3Q5JTY5 395 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 CBWD5Q5RIA9 395 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 PPP1R26Q5T8A7 1209 aaPredicted RBP11.79□□□□□ -0.52
CDH3-206ENST00000567674 TRIM68Q6AZZ1 485 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 RHBDF2Q6PJF5 856 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 TRIM59Q8IWR1 403 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 MLKLQ8NB16 471 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 RIN3Q8TB24 985 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 ZC3H10Q96K80 434 aaKnown RBP11.79□□□□□ -0.52
CDH3-206ENST00000567674 TWNKQ96RR1 684 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 PNKPQ96T60 521 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 RTKNQ9BST9 563 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms