RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 GMIPQ9P107 970 aa7.31□□□□□ -1.24
SF3B3-209ENST00000567635 CFAP97Q9P2B7 532 aa7.31□□□□□ -1.24
SF3B3-209ENST00000567635 TBC1D14Q9P2M4 693 aa7.31□□□□□ -1.24
SF3B3-209ENST00000567635 SCML2Q9UQR0 700 aa7.31□□□□□ -1.24
SF3B3-209ENST00000567635 CNOT1A5YKK6 2376 aaKnown RBP7.31□□□□□ -1.24
SF3B3-209ENST00000567635 CFAP54Q96N23 3096 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 BICDL2A1A5D9 508 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 CHURC1-FNTBB4DL54 471 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 K7ESF4 209 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 BIN1O00499 593 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 PMM2O15305 246 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 EGFP01133 1207 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 ACO1P21399 889 aaKnown RBP7.3□□□□□ -1.24
SF3B3-209ENST00000567635 BMP6P22004 513 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 CNR2P34972 360 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 ATP5C1P36542 298 aaKnown RBP7.3□□□□□ -1.24
SF3B3-209ENST00000567635 FNTBP49356 437 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 PGFP49763 221 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 RAD23BP54727 409 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 YWHAEP62258 255 aaKnown RBP7.3□□□□□ -1.24
SF3B3-209ENST00000567635 DHCR24Q15392 516 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 CCDC40Q4G0X9 1142 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 ZNF394Q53GI3 561 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 PPP1R26Q5T8A7 1209 aaPredicted RBP7.3□□□□□ -1.24
SF3B3-209ENST00000567635 NAIF1Q69YI7 327 aaPredicted RBP7.3□□□□□ -1.24
SF3B3-209ENST00000567635 HEATR6Q6AI08 1181 aaKnown RBP7.3□□□□□ -1.24
SF3B3-209ENST00000567635 KLHL10Q6JEL2 608 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 TTI2Q6NXR4 508 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 RHBDF2Q6PJF5 856 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 FOXR2Q6PJQ5 311 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 CLEC20AQ6ZU45 233 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 SLC4A11Q8NBS3 891 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 CCDC26Q8TAB7 109 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 NELFBQ8WX92 580 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 SECISBP2LQ93073 1101 aaKnown RBP7.3□□□□□ -1.24
SF3B3-209ENST00000567635 SLC35C1Q96A29 364 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 JAKMIP2Q96AA8 810 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 OTUB2Q96DC9 234 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 PKNOX2Q96KN3 472 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 HINFPQ9BQA5 517 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 NACA2Q9H009 215 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 EPC1Q9H2F5 836 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 PNPLA8Q9NP80 782 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 C2orf42Q9NWW7 574 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 RAB23Q9ULC3 237 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 SLC8A2Q9UPR5 921 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 SH3BP1Q9Y3L3 701 aa7.3□□□□□ -1.24
SF3B3-209ENST00000567635 SPTBN2O15020 2390 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 HRO43593 1189 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 TLR5O60602 858 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 RNF40O75150 1001 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 FGFR1OPO95684 399 aaKnown RBP7.29□□□□□ -1.24
SF3B3-209ENST00000567635 GNA14O95837 355 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 TBX18O95935 607 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 ADH1CP00326 375 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 CYP17A1P05093 508 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 TBXAS1P24557 533 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-209ENST00000567635 OPRD1P41143 372 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 PLA2G4AP47712 749 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 FMO5P49326 533 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 PSEN1P49768 467 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 KIF11P52732 1056 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 SLC8A3P57103 927 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 UBE2HP62256 183 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 DMWDQ09019 674 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 CETN1Q12798 172 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 LRMPQ12912 555 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 CUL2Q13617 745 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 GLIPR1L2Q4G1C9 344 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 ARHGAP17Q68EM7 881 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 PKN3Q6P5Z2 889 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 HTR3DQ70Z44 454 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 GPRIN1Q7Z2K8 1008 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 LONP2Q86WA8 852 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 ZNF276Q8N554 614 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 DCLK2Q8N568 766 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 CAMKK1Q8N5S9 505 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 GPR161Q8N6U8 529 aaKnown RBP7.29□□□□□ -1.24
SF3B3-209ENST00000567635 ANKRD52Q8NB46 1076 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 ZFRQ96KR1 1074 aaKnown RBP7.29□□□□□ -1.24
SF3B3-209ENST00000567635 ARID3AQ99856 593 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 KLF16Q9BXK1 252 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-209ENST00000567635 SRRTQ9BXP5 876 aaKnown RBP7.29□□□□□ -1.24
SF3B3-209ENST00000567635 OSER1Q9NX31 292 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 KIAA1468Q9P260 1216 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 NCDNQ9UBB6 729 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 DNMT3LQ9UJW3 386 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 KIAA1257Q9ULG3 409 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 SMG5Q9UPR3 1016 aaKnown RBP7.29□□□□□ -1.24
SF3B3-209ENST00000567635 USP34Q70CQ2 3546 aa7.29□□□□□ -1.24
SF3B3-209ENST00000567635 A0A0A0MRY4 1105 aa7.28□□□□□ -1.24
SF3B3-209ENST00000567635 CCDC163A0A0D9SF12 145 aa7.28□□□□□ -1.24
SF3B3-209ENST00000567635 A0A1W2PQH9 124 aa7.28□□□□□ -1.24
SF3B3-209ENST00000567635 K7EQS6 105 aa7.28□□□□□ -1.24
SF3B3-209ENST00000567635 SCAMP3O14828 347 aaKnown RBP7.28□□□□□ -1.24
SF3B3-209ENST00000567635 P4HA2O15460 535 aa7.28□□□□□ -1.24
SF3B3-209ENST00000567635 CYP26A1O43174 497 aa7.28□□□□□ -1.24
SF3B3-209ENST00000567635 APODP05090 189 aa7.28□□□□□ -1.24
SF3B3-209ENST00000567635 RALAP11233 206 aa7.28□□□□□ -1.24
SF3B3-209ENST00000567635 VDRP11473 427 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms