RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 CYP4V2Q6ZWL3 525 aaPredicted RBP24.3■■□□□ 1.48
LINC00543-201ENST00000567234 SLC26A9Q7LBE3 791 aa24.3■■□□□ 1.48
LINC00543-201ENST00000567234 TEKT4Q8WW24 435 aa24.3■■□□□ 1.48
LINC00543-201ENST00000567234 TBCBQ99426 244 aa24.3■■□□□ 1.48
LINC00543-201ENST00000567234 HNRNPABQ99729 332 aaKnown RBP24.3■■□□□ 1.48
LINC00543-201ENST00000567234 PIK3R2O00459 728 aa24.29■■□□□ 1.48
LINC00543-201ENST00000567234 CYB561D2O14569 222 aa24.29■■□□□ 1.48
LINC00543-201ENST00000567234 GABRDO14764 452 aa24.29■■□□□ 1.48
LINC00543-201ENST00000567234 CST8O60676 142 aa24.29■■□□□ 1.48
LINC00543-201ENST00000567234 CABYRO75952 493 aa24.29■■□□□ 1.48
LINC00543-201ENST00000567234 CCDC130P13994 396 aa24.29■■□□□ 1.48
LINC00543-201ENST00000567234 PRMT2P55345 433 aa24.29■■□□□ 1.48
LINC00543-201ENST00000567234 ZNF618Q5T7W0 954 aa24.29■■□□□ 1.48
LINC00543-201ENST00000567234 RELL1Q8IUW5 271 aa24.29■■□□□ 1.48
LINC00543-201ENST00000567234 SCUBE3Q8IX30 993 aa24.29■■□□□ 1.48
LINC00543-201ENST00000567234 B3GALNT2Q8NCR0 500 aa24.29■■□□□ 1.48
LINC00543-201ENST00000567234 PEBP4Q96S96 227 aa24.29■■□□□ 1.48
LINC00543-201ENST00000567234 CFAP73A6NFT4 308 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 ADORA2BP29275 332 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 PTPN9P43378 593 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 ARSEP51690 589 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 PPP2R2AP63151 447 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 PDK2Q15119 407 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 IZUMO3Q5VZ72 239 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 HIBCHQ6NVY1 386 aaPredicted RBP24.28■■□□□ 1.48
LINC00543-201ENST00000567234 MAP7D3Q8IWC1 876 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 TMEM86AQ8N2M4 240 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 SEC16BQ96JE7 1060 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 RABEP2Q9H5N1 569 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 PCDH9Q9HC56 1237 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 APOC4-APOC2K7ER74 178 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 XPO1O14980 1071 aaKnown RBP24.28■■□□□ 1.48
LINC00543-201ENST00000567234 HCRTO43612 131 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 MYCP01106 439 aaPredicted RBP24.28■■□□□ 1.48
LINC00543-201ENST00000567234 APOC2P02655 101 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 RPL9P32969 192 aaKnown RBP24.28■■□□□ 1.48
LINC00543-201ENST00000567234 THPOP40225 353 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 MLH1P40692 756 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 SCTRP47872 440 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 PTK7Q13308 1070 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 C15orf59Q2T9L4 293 aaPredicted RBP24.28■■□□□ 1.48
LINC00543-201ENST00000567234 OSTM1Q86WC4 334 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 ACTL9Q8TC94 416 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 SLC2A14Q8TDB8 520 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 HSPH1Q92598 858 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 RSRC1Q96IZ7 334 aaKnown RBP24.28■■□□□ 1.48
LINC00543-201ENST00000567234 GAD1Q99259 594 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 OSBPL7Q9BZF2 842 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 AGO3Q9H9G7 860 aaKnown RBP24.28■■□□□ 1.48
LINC00543-201ENST00000567234 SQORQ9Y6N5 450 aa24.28■■□□□ 1.48
LINC00543-201ENST00000567234 DNALI1O14645 258 aaPredicted RBP24.27■■□□□ 1.48
LINC00543-201ENST00000567234 GRAP2O75791 330 aa24.27■■□□□ 1.48
LINC00543-201ENST00000567234 OTUD4Q01804 1114 aaKnown RBP24.27■■□□□ 1.48
LINC00543-201ENST00000567234 FAM26DQ5JW98 314 aa24.27■■□□□ 1.48
LINC00543-201ENST00000567234 PGM2Q96G03 612 aa24.27■■□□□ 1.48
LINC00543-201ENST00000567234 CFAP57Q96MR6 1250 aa24.27■■□□□ 1.48
LINC00543-201ENST00000567234 LPIN3Q9BQK8 851 aa24.27■■□□□ 1.48
LINC00543-201ENST00000567234 TPX2Q9ULW0 747 aaKnown RBP24.27■■□□□ 1.48
LINC00543-201ENST00000567234 PADI3Q9ULW8 664 aa24.27■■□□□ 1.48
LINC00543-201ENST00000567234 ARL5CA6NH57 179 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 MEIS3P2A8K0S8 358 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 ZNF487B1APH4 448 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 CD48P09326 243 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 VPS41P49754 854 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 SEC24CP53992 1094 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 TFDP2Q14188 446 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 P3H1Q32P28 736 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 SH3PXD2AQ5TCZ1 1133 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 AGMOQ6ZNB7 445 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 CCDC25Q86WR0 208 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 RFX6Q8HWS3 928 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 DUSP16Q9BY84 665 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 ROPN1BQ9BZX4 212 aaPredicted RBP24.26■■□□□ 1.47
LINC00543-201ENST00000567234 CDC42EP4Q9H3Q1 356 aaKnown RBP24.26■■□□□ 1.47
LINC00543-201ENST00000567234 CENPHQ9H3R5 247 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 ROPN1Q9HAT0 212 aaPredicted RBP24.26■■□□□ 1.47
LINC00543-201ENST00000567234 MDM4O15151 490 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 SHBGP04278 402 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 PTPN1P18031 435 aaKnown RBP24.26■■□□□ 1.47
LINC00543-201ENST00000567234 LHX1P48742 406 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 CDH6P55285 790 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 PLCB3Q01970 1234 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 DSC3Q14574 896 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 ITIH4Q14624 930 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 TAF5Q15542 800 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 C6orf118Q5T5N4 469 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 WSCD1Q658N2 575 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 RNF180Q86T96 592 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 ZCCHC9Q8N567 271 aaKnown RBP24.26■■□□□ 1.47
LINC00543-201ENST00000567234 FAM172AQ8WUF8 416 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 CCT6BQ92526 530 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 CENPIQ92674 756 aaPredicted RBP24.26■■□□□ 1.47
LINC00543-201ENST00000567234 SENP8Q96LD8 212 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 C11orf84Q9BUA3 381 aaPredicted RBP24.26■■□□□ 1.47
LINC00543-201ENST00000567234 MAK16Q9BXY0 300 aaKnown RBP24.26■■□□□ 1.47
LINC00543-201ENST00000567234 B3GNT5Q9BYG0 378 aa24.26■■□□□ 1.47
LINC00543-201ENST00000567234 HMX1Q9NP08 348 aaPredicted RBP24.26■■□□□ 1.47
LINC00543-201ENST00000567234 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.26■■□□□ 1.47
LINC00543-201ENST00000567234 CAND2O75155 1236 aa24.25■■□□□ 1.47
LINC00543-201ENST00000567234 PAX3P23760 479 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms