RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 POLIQ9UNA4 740 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 A8MUI8 341 aa17.47■□□□□ 0.39
CMTM3-213ENST00000566756 DYNC1LI2O43237 492 aaPredicted RBP17.47■□□□□ 0.39
CMTM3-213ENST00000566756 CILPO75339 1184 aa17.47■□□□□ 0.39
CMTM3-213ENST00000566756 BANF1O75531 89 aa17.47■□□□□ 0.39
CMTM3-213ENST00000566756 F2P00734 622 aa17.47■□□□□ 0.39
CMTM3-213ENST00000566756 PHKA2P46019 1235 aa17.47■□□□□ 0.39
CMTM3-213ENST00000566756 ZNF143P52747 638 aaPredicted RBP17.47■□□□□ 0.39
CMTM3-213ENST00000566756 SLC18A2Q05940 514 aa17.47■□□□□ 0.39
CMTM3-213ENST00000566756 MBTD1Q05BQ5 628 aa17.47■□□□□ 0.39
CMTM3-213ENST00000566756 CCL14Q16627 93 aa17.47■□□□□ 0.39
CMTM3-213ENST00000566756 KCNT1Q5JUK3 1230 aa17.47■□□□□ 0.39
CMTM3-213ENST00000566756 TCP10LQ8TDR4 215 aa17.47■□□□□ 0.39
CMTM3-213ENST00000566756 SLC44A1Q8WWI5 657 aa17.47■□□□□ 0.39
CMTM3-213ENST00000566756 NLRP4Q96MN2 994 aa17.47■□□□□ 0.39
CMTM3-213ENST00000566756 SYNCQ9H7C4 482 aa17.47■□□□□ 0.39
CMTM3-213ENST00000566756 IFT122Q9HBG6 1241 aa17.47■□□□□ 0.39
CMTM3-213ENST00000566756 PRMT7Q9NVM4 692 aaPredicted RBP17.47■□□□□ 0.39
CMTM3-213ENST00000566756 NXF1Q9UBU9 619 aaKnown RBP17.47■□□□□ 0.39
CMTM3-213ENST00000566756 SIX4Q9UIU6 781 aa17.47■□□□□ 0.39
CMTM3-213ENST00000566756 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.47■□□□□ 0.39
CMTM3-213ENST00000566756 FGFR1P11362 822 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 VDRP11473 427 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 P4HA1P13674 534 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 ADRA1DP25100 572 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 TARSP26639 723 aaKnown RBP17.46■□□□□ 0.39
CMTM3-213ENST00000566756 PTPN4P29074 926 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 CLNS1AP54105 237 aaKnown RBP17.46■□□□□ 0.39
CMTM3-213ENST00000566756 ROR1Q01973 937 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 GAD2Q05329 585 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 KCNJ11Q14654 390 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 GRIK4Q16099 956 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 MARCH8Q5T0T0 291 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 TLK2Q86UE8 772 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 SPATA18Q8TC71 538 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 RTP4Q96DX8 246 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 TMEM176AQ96HP8 235 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 CNPY3Q9BT09 278 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 CDT1Q9H211 546 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 MANSC1Q9H8J5 431 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 RNPEPL1Q9HAU8 725 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 ZFP69BQ9UJL9 534 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 HAO1Q9UJM8 370 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 TEX264Q9Y6I9 313 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 CFAP69A5D8W1 941 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 DNAJC6O75061 913 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 MICAL2O94851 1124 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 MT-ND3P03897 115 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 NEK3P51956 506 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 EFTUD2Q15029 972 aaKnown RBP eCLIP17.46■□□□□ 0.39
CMTM3-213ENST00000566756 KYAT1Q16773 422 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 BBS9Q3SYG4 887 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 ENDOVQ8N8Q3 282 aaKnown RBP17.46■□□□□ 0.39
CMTM3-213ENST00000566756 FAM71DQ8N9W8 422 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 APOPT1Q96IL0 206 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 ZIC5Q96T25 663 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 TBC1D10AQ9BXI6 508 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 TRIM55Q9BYV6 548 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 TJP2Q9UDY2 1190 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 KIAA1257Q9ULG3 409 aa17.46■□□□□ 0.39
CMTM3-213ENST00000566756 TCRBV7S3A2A0A539 114 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 INO80B-WBP1J3KQ70 363 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 KLF11O14901 512 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 DIAPH2O60879 1101 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 STAU1O95793 577 aaKnown RBP17.45■□□□□ 0.38
CMTM3-213ENST00000566756 GJB1P08034 283 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 CD48P09326 243 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 CTGFP29279 349 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 ETV4P43268 484 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 GPD2P43304 727 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 CPT1AP50416 773 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 ZNF200P98182 395 aaPredicted RBP17.45■□□□□ 0.38
CMTM3-213ENST00000566756 CTC1Q2NKJ3 1217 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 CMPK2Q5EBM0 449 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 SH2D5Q6ZV89 423 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 CLNKQ7Z7G1 428 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 C1orf127Q8N9H9 656 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 NRCAMQ92823 1304 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 MIEF2Q96C03 454 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 INO80BQ9C086 356 aaPredicted RBP17.45■□□□□ 0.38
CMTM3-213ENST00000566756 SDCBP2Q9H190 292 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 ASB7Q9H672 318 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 PAK5Q9P286 719 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 IKBKGQ9Y6K9 419 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 CASP8AP2Q9UKL3 1982 aa17.45■□□□□ 0.38
CMTM3-213ENST00000566756 LIN7AO14910 233 aaPredicted RBP17.44■□□□□ 0.38
CMTM3-213ENST00000566756 LMNAP02545 664 aaKnown RBP17.44■□□□□ 0.38
CMTM3-213ENST00000566756 GSTA2P09210 222 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 GPD1P21695 349 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 CALB2P22676 271 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 MAGEA6P43360 314 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 FCGRTP55899 365 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 BASP1P80723 227 aaKnown RBP17.44■□□□□ 0.38
CMTM3-213ENST00000566756 CDC42EP1Q00587 391 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 NOGQ13253 232 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 PDK2Q15119 407 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 TAF1BQ53T94 588 aaPredicted RBP17.44■□□□□ 0.38
CMTM3-213ENST00000566756 FAM91A1Q658Y4 838 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 C4orf22Q6V702 233 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 ZNF410Q86VK4 478 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms