RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 TRIM66O15016 1216 aa14.24□□□□□ -0.13
COMMD4-214ENST00000566230 PRPF6O94906 941 aaKnown RBP14.24□□□□□ -0.13
COMMD4-214ENST00000566230 ADH1CP00326 375 aa14.24□□□□□ -0.13
COMMD4-214ENST00000566230 CFIP05156 583 aa14.24□□□□□ -0.13
COMMD4-214ENST00000566230 ADH5P11766 374 aa14.24□□□□□ -0.13
COMMD4-214ENST00000566230 BYSLQ13895 437 aaKnown RBP14.24□□□□□ -0.13
COMMD4-214ENST00000566230 ACAP1Q15027 740 aa14.24□□□□□ -0.13
COMMD4-214ENST00000566230 DUOXA1Q1HG43 343 aa14.24□□□□□ -0.13
COMMD4-214ENST00000566230 ETFBKMTQ8IXQ9 262 aa14.24□□□□□ -0.13
COMMD4-214ENST00000566230 CCDC65Q8IXS2 484 aa14.24□□□□□ -0.13
COMMD4-214ENST00000566230 CEP57L1Q8IYX8 460 aa14.24□□□□□ -0.13
COMMD4-214ENST00000566230 PGBD3Q8N328 593 aa14.24□□□□□ -0.13
COMMD4-214ENST00000566230 CHCHD4Q8N4Q1 142 aa14.24□□□□□ -0.13
COMMD4-214ENST00000566230 ANKRD36BP1Q96IX9 119 aa14.24□□□□□ -0.13
COMMD4-214ENST00000566230 ZFRQ96KR1 1074 aaKnown RBP14.24□□□□□ -0.13
COMMD4-214ENST00000566230 C7orf25Q9BPX7 421 aa14.24□□□□□ -0.13
COMMD4-214ENST00000566230 PANK4Q9NVE7 773 aa14.24□□□□□ -0.13
COMMD4-214ENST00000566230 A0A1B0GVL5 298 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 CST3P01034 146 aaPredicted RBP14.23□□□□□ -0.13
COMMD4-214ENST00000566230 SERPINF2P08697 491 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 SLFN14P0C7P3 912 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 MBL2P11226 248 aaPredicted RBP14.23□□□□□ -0.13
COMMD4-214ENST00000566230 CD59P13987 128 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 IDEP14735 1019 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 GABRG2P18507 467 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 HOXD12P35452 270 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 GNL1P36915 607 aaPredicted RBP14.23□□□□□ -0.13
COMMD4-214ENST00000566230 DPP6P42658 865 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 ALCAMQ13740 583 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 DUOXA2Q1HG44 320 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 TDRD10Q5VZ19 366 aaKnown RBP14.23□□□□□ -0.13
COMMD4-214ENST00000566230 CBWD2Q8IUF1 395 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 NAT16Q8N8M0 369 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 GLIS3Q8NEA6 775 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 OR2I1PQ8NGU4 316 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 WBP2Q969T9 261 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 MMS19Q96T76 1030 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 GTPBP2Q9BX10 602 aaKnown RBP14.23□□□□□ -0.13
COMMD4-214ENST00000566230 TRIM9Q9C026 710 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 ZNF518BQ9C0D4 1074 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 EHD2Q9NZN4 543 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 CHMP5Q9NZZ3 219 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 TBC1D14Q9P2M4 693 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 HPSEQ9Y251 543 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 APC2O95996 2303 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 KNL1Q8NG31 2342 aa14.23□□□□□ -0.13
COMMD4-214ENST00000566230 MYH10P35580 1976 aa14.22□□□□□ -0.13
COMMD4-214ENST00000566230 PVALEFA0A1B0GWK0 134 aa14.22□□□□□ -0.13
COMMD4-214ENST00000566230 E2F8A0AVK6 867 aa14.22□□□□□ -0.13
COMMD4-214ENST00000566230 GOLGA6L4A6NEF3 574 aa14.22□□□□□ -0.13
COMMD4-214ENST00000566230 ZNF233A6NK53 670 aa14.22□□□□□ -0.13
COMMD4-214ENST00000566230 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.22□□□□□ -0.13
COMMD4-214ENST00000566230 CLDN5O00501 218 aa14.22□□□□□ -0.13
COMMD4-214ENST00000566230 TRIM24O15164 1050 aa14.22□□□□□ -0.13
COMMD4-214ENST00000566230 AP5Z1O43299 807 aa14.22□□□□□ -0.13
COMMD4-214ENST00000566230 TULP3O75386 442 aa14.22□□□□□ -0.13
COMMD4-214ENST00000566230 TACC1O75410 805 aa14.22□□□□□ -0.13
COMMD4-214ENST00000566230 TNNC2P02585 160 aa14.22□□□□□ -0.13
COMMD4-214ENST00000566230 MYL1P05976 194 aa14.22□□□□□ -0.13
COMMD4-214ENST00000566230 PTPN1P18031 435 aaKnown RBP14.22□□□□□ -0.13
COMMD4-214ENST00000566230 RPL6Q02878 288 aaKnown RBP14.22□□□□□ -0.13
COMMD4-214ENST00000566230 GAD2Q05329 585 aa14.22□□□□□ -0.13
COMMD4-214ENST00000566230 GFPT1Q06210 699 aaPredicted RBP14.22□□□□□ -0.13
COMMD4-214ENST00000566230 HS2ST1Q7LGA3 356 aa14.22□□□□□ -0.13
COMMD4-214ENST00000566230 TRAPPC11Q7Z392 1133 aa14.22□□□□□ -0.13
COMMD4-214ENST00000566230 DDX42Q86XP3 938 aaKnown RBP eCLIP14.22□□□□□ -0.13
COMMD4-214ENST00000566230 MIB1Q86YT6 1006 aa14.22□□□□□ -0.13
COMMD4-214ENST00000566230 CEP76Q8TAP6 659 aa14.22□□□□□ -0.13
COMMD4-214ENST00000566230 SLITRK1Q96PX8 696 aa14.22□□□□□ -0.13
COMMD4-214ENST00000566230 B3GNT5Q9BYG0 378 aa14.22□□□□□ -0.13
COMMD4-214ENST00000566230 DPEP3Q9H4B8 488 aa14.22□□□□□ -0.13
COMMD4-214ENST00000566230 CD248Q9HCU0 757 aa14.22□□□□□ -0.13
COMMD4-214ENST00000566230 R3HCC1Q9Y3T6 440 aaKnown RBP14.22□□□□□ -0.13
COMMD4-214ENST00000566230 A0A1W2PQF6 199 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 TBC1D3BA6NDS4 549 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 KIAA0391O15091 583 aaKnown RBP14.21□□□□□ -0.13
COMMD4-214ENST00000566230 HOXC11O43248 304 aaPredicted RBP14.21□□□□□ -0.13
COMMD4-214ENST00000566230 COCHO43405 550 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 OPHN1O60890 802 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 PFKFB1P16118 471 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 HOXD13P35453 343 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 WASP42768 502 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 SYKP43405 635 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 ATXN3P54252 364 aaPredicted RBP14.21□□□□□ -0.13
COMMD4-214ENST00000566230 ZNF33AQ06730 810 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 IFRD2Q12894 506 aaPredicted RBP14.21□□□□□ -0.13
COMMD4-214ENST00000566230 SURF1Q15526 300 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 SLC36A4Q6YBV0 504 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 STXBP4Q6ZWJ1 553 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 RAB44Q7Z6P3 723 aaPredicted RBP14.21□□□□□ -0.13
COMMD4-214ENST00000566230 TMEM25Q86YD3 366 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 WDR49Q8IV35 697 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 SLC41A1Q8IVJ1 513 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 BBS7Q8IWZ6 715 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 HDDC3Q8N4P3 179 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 MINDY1Q8N5J2 469 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 ZNF513Q8N8E2 541 aaPredicted RBP14.21□□□□□ -0.13
COMMD4-214ENST00000566230 OR6B3Q8NGW1 331 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 KCNV2Q8TDN2 545 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 OTUB2Q96DC9 234 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms