RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 PNKPQ96T60 521 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 MED10Q9BTT4 135 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 APOBEC3GQ9HC16 384 aaKnown RBP16.05■□□□□ 0.16
CMTM3-212ENST00000566121 KRT82Q9NSB4 513 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 CFAP97Q9P2B7 532 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 MMP17Q9ULZ9 603 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 STARD13Q9Y3M8 1113 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 USP3Q9Y6I4 520 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 SLC16A3O15427 465 aaKnown RBP16.04■□□□□ 0.16
CMTM3-212ENST00000566121 GREM1O60565 184 aa16.04■□□□□ 0.16
CMTM3-212ENST00000566121 MBL2P11226 248 aaPredicted RBP16.04■□□□□ 0.16
CMTM3-212ENST00000566121 PIK3CAP42336 1068 aa16.04■□□□□ 0.16
CMTM3-212ENST00000566121 GCLMP48507 274 aa16.04■□□□□ 0.16
CMTM3-212ENST00000566121 DGKEP52429 567 aa16.04■□□□□ 0.16
CMTM3-212ENST00000566121 GAD2Q05329 585 aa16.04■□□□□ 0.16
CMTM3-212ENST00000566121 SPDYCQ5MJ68 293 aa16.04■□□□□ 0.16
CMTM3-212ENST00000566121 PRR23CQ6ZRP0 262 aa16.04■□□□□ 0.16
CMTM3-212ENST00000566121 CLEC20AQ6ZU45 233 aa16.04■□□□□ 0.16
CMTM3-212ENST00000566121 CEP68Q76N32 757 aa16.04■□□□□ 0.16
CMTM3-212ENST00000566121 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.04■□□□□ 0.16
CMTM3-212ENST00000566121 ETFBKMTQ8IXQ9 262 aa16.04■□□□□ 0.16
CMTM3-212ENST00000566121 PHTF2Q8N3S3 785 aa16.04■□□□□ 0.16
CMTM3-212ENST00000566121 C12orf29Q8N999 325 aa16.04■□□□□ 0.16
CMTM3-212ENST00000566121 FBXL13Q8NEE6 735 aa16.04■□□□□ 0.16
CMTM3-212ENST00000566121 CYFIP2Q96F07 1278 aa16.04■□□□□ 0.16
CMTM3-212ENST00000566121 CDK5RAP1Q96SZ6 601 aaKnown RBP16.04■□□□□ 0.16
CMTM3-212ENST00000566121 DUSP16Q9BY84 665 aa16.04■□□□□ 0.16
CMTM3-212ENST00000566121 CLIC5Q9NZA1 410 aa16.04■□□□□ 0.16
CMTM3-212ENST00000566121 MARK1Q9P0L2 795 aa16.04■□□□□ 0.16
CMTM3-212ENST00000566121 CDV3Q9UKY7 258 aaKnown RBP16.04■□□□□ 0.16
CMTM3-212ENST00000566121 USP18Q9UMW8 372 aa16.04■□□□□ 0.16
CMTM3-212ENST00000566121 ATG2BQ96BY7 2078 aa16.03■□□□□ 0.16
CMTM3-212ENST00000566121 TLR5O60602 858 aa16.03■□□□□ 0.16
CMTM3-212ENST00000566121 BEST1O76090 585 aa16.03■□□□□ 0.16
CMTM3-212ENST00000566121 PPP1R2P41236 205 aa16.03■□□□□ 0.16
CMTM3-212ENST00000566121 KIF11P52732 1056 aa16.03■□□□□ 0.16
CMTM3-212ENST00000566121 FKBP3Q00688 224 aaKnown RBP16.03■□□□□ 0.16
CMTM3-212ENST00000566121 SPEM2Q0P670 501 aa16.03■□□□□ 0.16
CMTM3-212ENST00000566121 BECN1Q14457 450 aa16.03■□□□□ 0.16
CMTM3-212ENST00000566121 PLK5Q496M5 336 aa16.03■□□□□ 0.16
CMTM3-212ENST00000566121 ZNF658Q5TYW1 1059 aaPredicted RBP16.03■□□□□ 0.16
CMTM3-212ENST00000566121 ARHGAP17Q68EM7 881 aa16.03■□□□□ 0.16
CMTM3-212ENST00000566121 NAIF1Q69YI7 327 aaPredicted RBP16.03■□□□□ 0.16
CMTM3-212ENST00000566121 HEATR6Q6AI08 1181 aaKnown RBP16.03■□□□□ 0.16
CMTM3-212ENST00000566121 SPOPLQ6IQ16 392 aa16.03■□□□□ 0.16
CMTM3-212ENST00000566121 SCARA5Q6ZMJ2 495 aa16.03■□□□□ 0.16
CMTM3-212ENST00000566121 NUDT18Q6ZVK8 323 aa16.03■□□□□ 0.16
CMTM3-212ENST00000566121 CCDC186Q7Z3E2 898 aa16.03■□□□□ 0.16
CMTM3-212ENST00000566121 DDX1Q92499 740 aaKnown RBP16.03■□□□□ 0.16
CMTM3-212ENST00000566121 CNOT6LQ96LI5 555 aaKnown RBP16.03■□□□□ 0.16
CMTM3-212ENST00000566121 KLF16Q9BXK1 252 aaPredicted RBP16.03■□□□□ 0.16
CMTM3-212ENST00000566121 RAB20Q9NX57 234 aa16.03■□□□□ 0.16
CMTM3-212ENST00000566121 RHOBTB1O94844 696 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 KAT7O95251 611 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 SMC2O95347 1197 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 ABL1P00519 1130 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 APODP05090 189 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 EPB41P11171 864 aaKnown RBP16.02■□□□□ 0.16
CMTM3-212ENST00000566121 ADH5P11766 374 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 CCDC130P13994 396 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 ATP5C1P36542 298 aaKnown RBP16.02■□□□□ 0.16
CMTM3-212ENST00000566121 KIR2DL1P43626 348 aaPredicted RBP16.02■□□□□ 0.16
CMTM3-212ENST00000566121 MAP3K7CLP57077 242 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 LRRC63Q05C16 580 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 SRSF5Q13243 272 aaKnown RBP16.02■□□□□ 0.16
CMTM3-212ENST00000566121 CRY1Q16526 586 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 SMYD5Q6GMV2 418 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 TADA2BQ86TJ2 420 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 OLIG1Q8TAK6 271 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 CHAMP1Q96JM3 812 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 TWNKQ96RR1 684 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 CCSER2Q9H7U1 834 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 SPHK2Q9NRA0 654 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 SMPD4Q9NXE4 827 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 GMIPQ9P107 970 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 HMGXB4Q9UGU5 601 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 HOOK1Q9UJC3 728 aaKnown RBP16.02■□□□□ 0.16
CMTM3-212ENST00000566121 ZNF510Q9Y2H8 683 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 SH3BP1Q9Y3L3 701 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 GTF3C3Q9Y5Q9 886 aa16.02■□□□□ 0.16
CMTM3-212ENST00000566121 PRCPP42785 496 aa16.01■□□□□ 0.15
CMTM3-212ENST00000566121 PLA2G4AP47712 749 aa16.01■□□□□ 0.15
CMTM3-212ENST00000566121 MXI1P50539 228 aa16.01■□□□□ 0.15
CMTM3-212ENST00000566121 GOLGA8FQ08AF8 430 aa16.01■□□□□ 0.15
CMTM3-212ENST00000566121 GOLGA8DPQ0D2H9 430 aa16.01■□□□□ 0.15
CMTM3-212ENST00000566121 USP39Q53GS9 565 aaKnown RBP16.01■□□□□ 0.15
CMTM3-212ENST00000566121 RAB41Q5JT25 222 aa16.01■□□□□ 0.15
CMTM3-212ENST00000566121 LY6G5CQ5SRR4 150 aa16.01■□□□□ 0.15
CMTM3-212ENST00000566121 TRMT11Q7Z4G4 463 aaKnown RBP16.01■□□□□ 0.15
CMTM3-212ENST00000566121 KBTBD6Q86V97 674 aa16.01■□□□□ 0.15
CMTM3-212ENST00000566121 DUSP15Q9H1R2 295 aaPredicted RBP16.01■□□□□ 0.15
CMTM3-212ENST00000566121 VPS45Q9NRW7 570 aa16.01■□□□□ 0.15
CMTM3-212ENST00000566121 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.01■□□□□ 0.15
CMTM3-212ENST00000566121 WDR35Q9P2L0 1181 aa16.01■□□□□ 0.15
CMTM3-212ENST00000566121 KIAA1257Q9ULG3 409 aa16.01■□□□□ 0.15
CMTM3-212ENST00000566121 MAPK8IP1Q9UQF2 711 aa16.01■□□□□ 0.15
CMTM3-212ENST00000566121 CHD8Q9HCK8 2581 aa16.01■□□□□ 0.15
CMTM3-212ENST00000566121 CEP295Q9C0D2 2601 aa16■□□□□ 0.15
CMTM3-212ENST00000566121 TM4SF5O14894 197 aa16■□□□□ 0.15
CMTM3-212ENST00000566121 ALDH1A2O94788 518 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms