RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 CAVIN2O95810 425 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 DCNP07585 359 aaKnown RBP14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 MBL2P11226 248 aaPredicted RBP14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 KLK7P49862 253 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 BCAT1P54687 386 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 ZXDBP98169 803 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 USP4Q13107 963 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 RUNX3Q13761 415 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 PDGFRLQ15198 375 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 STILQ15468 1287 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 CNGA2Q16280 664 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 ITPRIPL2Q3MIP1 535 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 PKDCCQ504Y2 493 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 SMYD5Q6GMV2 418 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 LCLAT1Q6UWP7 414 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 LUZP1Q86V48 1076 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 KIAA1958Q8N8K9 716 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 RIN3Q8TB24 985 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 SH3RF2Q8TEC5 729 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 OSCP1Q8WVF1 389 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 FAM3CQ92520 227 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 GANQ9H2C0 597 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 PLCB1Q9NQ66 1216 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 SIK3Q9Y2K2 1263 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 MTF2Q9Y483 593 aaPredicted RBP14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 FHOD1Q9Y613 1164 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 CPQQ9Y646 472 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 USP3Q9Y6I4 520 aa14.57□□□□□ -0.08
HERPUD1-210ENST00000565966 CACNA1HO95180 2353 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 LEFTY2O00292 366 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 TULP2O00295 520 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 FOXN3O00409 490 aaPredicted RBP14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 XPO1O14980 1071 aaKnown RBP14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 COCHO43405 550 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 UCHL3P15374 230 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 TARSP26639 723 aaKnown RBP14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 USP8P40818 1118 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 PSEN1P49768 467 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 TNK2Q07912 1038 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 PDE4CQ08493 712 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 BST2Q10589 180 aaKnown RBP14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 RAB41Q5JT25 222 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 TRIM68Q6AZZ1 485 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 CCDC186Q7Z3E2 898 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 PIGZQ86VD9 579 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 RALGPS2Q86X27 583 aaPredicted RBP14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 DDX42Q86XP3 938 aaKnown RBP eCLIP14.56□□□□□ -0.082e-8■■■■■ 39.1
HERPUD1-210ENST00000565966 CCDC105Q8IYK2 499 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 DTWD2Q8NBA8 298 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 TTC16Q8NEE8 873 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 PRSS33Q8NF86 280 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 TTC8Q8TAM2 541 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 UBA3Q8TBC4 463 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 NAA15Q9BXJ9 866 aaKnown RBP14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 EBF3Q9H4W6 596 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 CCSER2Q9H7U1 834 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 ACP6Q9NPH0 428 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 HPS4Q9NQG7 708 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 DUS2Q9NX74 493 aaKnown RBP14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 DLGAP2Q9P1A6 1054 aa14.56□□□□□ -0.08
HERPUD1-210ENST00000565966 SPECC1L-ADORA2AF8WAN1 911 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 EPHB6O15197 1021 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 CYP26A1O43174 497 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 TLR5O60602 858 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 PNMA6AP0CW24 399 aaPredicted RBP14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 CTHP32929 405 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 MAGEA9P43362 315 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 SOX9P48436 509 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 IFNAR2P48551 515 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 PGFP49763 221 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 PTPN5P54829 565 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 AMPD2Q01433 879 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 UBXN1Q04323 297 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 TCF15Q12870 199 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 RAPGEF1Q13905 1077 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 DRAP1Q14919 205 aaPredicted RBP14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 SYCP1Q15431 976 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 LRSAM1Q6UWE0 723 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 FAM71AQ8IYT1 594 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 ZNF276Q8N554 614 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 CLDN23Q96B33 292 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 ERGIC2Q96RQ1 377 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 NACA2Q9H009 215 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 IRF2BPLQ9H1B7 796 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 RTN4Q9NQC3 1192 aaKnown RBP14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 CYLDQ9NQC7 956 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 SMPD4Q9NXE4 827 aa14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 NDRG2Q9UN36 371 aaKnown RBP14.55□□□□□ -0.08
HERPUD1-210ENST00000565966 A0A1W2PQH9 124 aa14.54□□□□□ -0.08
HERPUD1-210ENST00000565966 M0QYV0 167 aa14.54□□□□□ -0.08
HERPUD1-210ENST00000565966 SLC9A3R1O14745 358 aaPredicted RBP14.54□□□□□ -0.08
HERPUD1-210ENST00000565966 TEX33O43247 280 aa14.54□□□□□ -0.08
HERPUD1-210ENST00000565966 THAP12O43422 761 aa14.54□□□□□ -0.08
HERPUD1-210ENST00000565966 SETSIPP0DME0 302 aa14.54□□□□□ -0.08
HERPUD1-210ENST00000565966 RARGP13631 454 aa14.54□□□□□ -0.08
HERPUD1-210ENST00000565966 GNA15P30679 374 aa14.54□□□□□ -0.08
HERPUD1-210ENST00000565966 CLCN1P35523 988 aa14.54□□□□□ -0.08
HERPUD1-210ENST00000565966 ATP5C1P36542 298 aaKnown RBP14.54□□□□□ -0.08
HERPUD1-210ENST00000565966 RPS9P46781 194 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms