RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 ZBTB9Q96C00 473 aa13.27□□□□□ -0.28
NSMCE1-208ENST00000565070 TIFAQ96CG3 184 aa13.27□□□□□ -0.28
NSMCE1-208ENST00000565070 ZIM3Q96PE6 472 aa13.27□□□□□ -0.28
NSMCE1-208ENST00000565070 VN1R3Q9BXE9 311 aa13.27□□□□□ -0.28
NSMCE1-208ENST00000565070 MRPL17Q9NRX2 175 aaKnown RBP13.27□□□□□ -0.28
NSMCE1-208ENST00000565070 ADAM21Q9UKJ8 722 aa13.27□□□□□ -0.28
NSMCE1-208ENST00000565070 USTQ9Y2C2 406 aa13.27□□□□□ -0.28
NSMCE1-208ENST00000565070 BACE2Q9Y5Z0 518 aa13.27□□□□□ -0.28
NSMCE1-208ENST00000565070 TNRC18O15417 2968 aaPredicted RBP13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 F8VP50 259 aa13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 M0QYV0 167 aa13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 ERBB2P04626 1255 aa13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 CTSAP10619 480 aa13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 RALAP11233 206 aa13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 KRT3P12035 628 aa13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 RFC1P35251 1148 aaPredicted RBP13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 PSMC1P62191 440 aaKnown RBP13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 SMARCB1Q12824 385 aa13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 PSMD5Q16401 504 aa13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 RTP2Q5QGT7 225 aa13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 CFAP58Q5T655 872 aa13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 PDE12Q6L8Q7 609 aaKnown RBP13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 OSTM1Q86WC4 334 aa13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 CCDC105Q8IYK2 499 aa13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 RCOR2Q8IZ40 523 aa13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 DCP1BQ8IZD4 617 aaKnown RBP13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 B3GALNT2Q8NCR0 500 aa13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 MCRS1Q96EZ8 462 aa13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 SYT15Q9BQS2 421 aa13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 OSBPL8Q9BZF1 889 aa13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 HOMER3Q9NSC5 361 aa13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 TJP2Q9UDY2 1190 aa13.27□□□□□ -0.29
NSMCE1-208ENST00000565070 H3BNC9 293 aa13.26□□□□□ -0.29
NSMCE1-208ENST00000565070 PDGFRBP09619 1106 aa13.26□□□□□ -0.29
NSMCE1-208ENST00000565070 TCF4P15884 667 aa13.26□□□□□ -0.29
NSMCE1-208ENST00000565070 LMO2P25791 158 aa13.26□□□□□ -0.29
NSMCE1-208ENST00000565070 PTPN7P35236 360 aa13.26□□□□□ -0.29
NSMCE1-208ENST00000565070 KCTD19Q17RG1 926 aaPredicted RBP13.26□□□□□ -0.29
NSMCE1-208ENST00000565070 INTS6LQ5JSJ4 861 aaKnown RBP13.26□□□□□ -0.29
NSMCE1-208ENST00000565070 ZDHHC24Q6UX98 284 aa13.26□□□□□ -0.29
NSMCE1-208ENST00000565070 TMC3Q7Z5M5 1100 aa13.26□□□□□ -0.29
NSMCE1-208ENST00000565070 POLNQ7Z5Q5 900 aa13.26□□□□□ -0.29
NSMCE1-208ENST00000565070 ACOT1Q86TX2 421 aa13.26□□□□□ -0.29
NSMCE1-208ENST00000565070 EXOC4Q96A65 974 aa13.26□□□□□ -0.29
NSMCE1-208ENST00000565070 RBM41Q96IZ5 413 aaKnown RBP13.26□□□□□ -0.29
NSMCE1-208ENST00000565070 FMO2Q99518 471 aa13.26□□□□□ -0.29
NSMCE1-208ENST00000565070 TXLNGYQ9BZA5 131 aa13.26□□□□□ -0.29
NSMCE1-208ENST00000565070 TRIM31Q9BZY9 425 aa13.26□□□□□ -0.29
NSMCE1-208ENST00000565070 DCLK3Q9C098 648 aa13.26□□□□□ -0.29
NSMCE1-208ENST00000565070 ZBP1Q9H171 429 aa13.26□□□□□ -0.29
NSMCE1-208ENST00000565070 GRHL1Q9NZI5 618 aa13.26□□□□□ -0.29
NSMCE1-208ENST00000565070 MTRRQ9UBK8 725 aa13.26□□□□□ -0.29
NSMCE1-208ENST00000565070 GOLGA8KD6RF30 607 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 LPXNO60711 386 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 PPFIA2O75334 1257 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 ARHGEF15O94989 841 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 ECEL1O95672 775 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 PTPN1P18031 435 aaKnown RBP13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 FLT3P36888 993 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 HSD17B3P37058 310 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 SSR1P43307 286 aaKnown RBP13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 RPL21P46778 160 aaKnown RBP13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 GYS2P54840 703 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 COPS2P61201 443 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 GPM6BQ13491 265 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 MTMR3Q13615 1198 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 UAP1Q16222 522 aaPredicted RBP13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 SPDYCQ5MJ68 293 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 KIAA0319Q5VV43 1072 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 LRIG3Q6UXM1 1119 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 SYDE1Q6ZW31 735 aaPredicted RBP13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 TAS1R1Q7RTX1 841 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 ANKS1BQ7Z6G8 1248 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 CCDC50Q8IVM0 306 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 JOSD2Q8TAC2 188 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 SPPL3Q8TCT6 385 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 C1orf54Q8WWF1 131 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 SLITRK1Q96PX8 696 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 RUFY1Q96T51 708 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 RTP3Q9BQQ7 232 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 FAM129AQ9BZQ8 928 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 LMAN2LQ9H0V9 348 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 SYNCQ9H7C4 482 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 NGRNQ9NPE2 291 aaKnown RBP13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 TLR9Q9NR96 1032 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 PSD3Q9NYI0 1048 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 FNIP2Q9P278 1114 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 TSPAN16Q9UKR8 245 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 SNX24Q9Y343 169 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 IRAK3Q9Y616 596 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 TMEM265A0A087WTH1 108 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 GOLGA8SH3BPF8 625 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 TBC1D4O60343 1298 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 ACAT1P24752 427 aaKnown RBP13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 KCNJ1P48048 391 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 LLGL1Q15334 1064 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 CCNG2Q16589 344 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 NFE2Q16621 373 aaPredicted RBP13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 PKDCCQ504Y2 493 aa13.25□□□□□ -0.29
NSMCE1-208ENST00000565070 SLC8B1Q6J4K2 584 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms